Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP13P45452 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP13P45452 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
MMP13P45452 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 AC135050.7-201ENST00000624508 2218 ntBASIC19.87■□□□□ 0.77
MMP13P45452 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.87■□□□□ 0.77
MMP13P45452 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.87■□□□□ 0.77
MMP13P45452 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.87■□□□□ 0.77
MMP13P45452 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.87■□□□□ 0.77
MMP13P45452 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 AL390961.4-201ENST00000623958 2535 ntBASIC19.87■□□□□ 0.77
MMP13P45452 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP13P45452 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP13P45452 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
MMP13P45452 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 KRT8P8-201ENST00000434750 1448 ntBASIC19.86■□□□□ 0.77
MMP13P45452 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP13P45452 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP13P45452 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 AC120498.9-201ENST00000339021 3867 ntBASIC19.86■□□□□ 0.77
MMP13P45452 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP13P45452 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP13P45452 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MMP13P45452 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP13P45452 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP13P45452 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP13P45452 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MMP13P45452 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MMP13P45452 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 KRT16P5-201ENST00000455284 522 ntBASIC19.85■□□□□ 0.77
MMP13P45452 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.85■□□□□ 0.77
MMP13P45452 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.85■□□□□ 0.77
MMP13P45452 AL359736.2-201ENST00000621992 437 ntBASIC19.85■□□□□ 0.77
MMP13P45452 FAM197Y4-202ENST00000622692 608 ntBASIC19.85■□□□□ 0.77
MMP13P45452 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP13P45452 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP13P45452 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP13P45452 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP13P45452 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP13P45452 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP13P45452 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP13P45452 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP13P45452 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MMP13P45452 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP13P45452 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MMP13P45452 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP13P45452 AC098590.1-201ENST00000468126 897 ntBASIC19.84■□□□□ 0.77
MMP13P45452 AC142381.4-202ENST00000563973 229 ntBASIC19.84■□□□□ 0.77
MMP13P45452 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.84■□□□□ 0.77
MMP13P45452 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP13P45452 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP13P45452 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms