Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC3P40938 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC3P40938 CCR12P-201ENST00000446203 998 ntBASIC17.48■□□□□ 0.39
RFC3P40938 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
RFC3P40938 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
RFC3P40938 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC3P40938 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC3P40938 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RFC3P40938 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC3P40938 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC3P40938 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC3P40938 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC3P40938 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC3P40938 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC3P40938 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFC3P40938 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RFC3P40938 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC3P40938 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC3P40938 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RFC3P40938 AC026471.1-201ENST00000564629 3026 ntBASIC17.47■□□□□ 0.39
RFC3P40938 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC3P40938 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
RFC3P40938 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFC3P40938 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
RFC3P40938 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.47■□□□□ 0.39
RFC3P40938 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC3P40938 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC3P40938 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RFC3P40938 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RFC3P40938 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC3P40938 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC3P40938 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
RFC3P40938 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC3P40938 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RFC3P40938 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RFC3P40938 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC3P40938 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 AC087289.5-201ENST00000586076 3175 ntBASIC17.46■□□□□ 0.39
RFC3P40938 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 DUX4L26-201ENST00000489078 1255 ntBASIC17.46■□□□□ 0.39
RFC3P40938 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 AC006011.2-201ENST00000621313 1158 ntBASIC17.46■□□□□ 0.39
RFC3P40938 AL590326.2-201ENST00000625139 305 ntBASIC17.46■□□□□ 0.39
RFC3P40938 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RFC3P40938 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC3P40938 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RFC3P40938 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFC3P40938 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFC3P40938 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RFC3P40938 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.45■□□□□ 0.38
RFC3P40938 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms