Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC8P31273 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC8P31273 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXC8P31273 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXC8P31273 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
HOXC8P31273 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXC8P31273 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC8P31273 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HOXC8P31273 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HOXC8P31273 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
HOXC8P31273 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HOXC8P31273 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC8P31273 MCCD1P1-208ENST00000445732 328 ntBASIC20.88■□□□□ 0.93
HOXC8P31273 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 CLEC4GP1-201ENST00000596555 870 ntBASIC20.88■□□□□ 0.93
HOXC8P31273 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.88■□□□□ 0.93
HOXC8P31273 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXC8P31273 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXC8P31273 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXC8P31273 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXC8P31273 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXC8P31273 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HOXC8P31273 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HOXC8P31273 AL645929.1-201ENST00000420084 975 ntBASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HOXC8P31273 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXC8P31273 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXC8P31273 AC024243.1-201ENST00000609234 778 ntBASIC20.87■□□□□ 0.93
HOXC8P31273 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC8P31273 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXC8P31273 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HOXC8P31273 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXC8P31273 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC8P31273 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXC8P31273 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXC8P31273 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HOXC8P31273 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXC8P31273 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HOXC8P31273 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXC8P31273 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXC8P31273 AL121894.2-201ENST00000602977 491 ntBASIC20.86■□□□□ 0.93
HOXC8P31273 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.86■□□□□ 0.93
HOXC8P31273 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXC8P31273 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC8P31273 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HOXC8P31273 TEX21P-204ENST00000641479 1693 ntBASIC20.86■□□□□ 0.93
HOXC8P31273 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HOXC8P31273 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC8P31273 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC8P31273 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC8P31273 AL450487.1-201ENST00000426799 995 ntBASIC20.85■□□□□ 0.93
HOXC8P31273 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms