Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TM4SF1P30408 TSPY22P-201ENST00000427496 604 ntBASIC23.81■■□□□ 1.4
TM4SF1P30408 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 AC079781.3-201ENST00000449110 356 ntBASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.81■■□□□ 1.4
TM4SF1P30408 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.81■■□□□ 1.4
TM4SF1P30408 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 AC023511.2-201ENST00000618803 211 ntBASIC23.81■■□□□ 1.4
TM4SF1P30408 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TM4SF1P30408 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.81■■□□□ 1.4
TM4SF1P30408 AL391807.1-203ENST00000604392 2365 ntBASIC23.81■■□□□ 1.4
TM4SF1P30408 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.81■■□□□ 1.4
TM4SF1P30408 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.81■■□□□ 1.4
TM4SF1P30408 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TM4SF1P30408 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF1P30408 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF1P30408 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TM4SF1P30408 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
TM4SF1P30408 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF1P30408 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TM4SF1P30408 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF1P30408 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.8■■□□□ 1.4
TM4SF1P30408 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TM4SF1P30408 RNF126P1-202ENST00000569893 925 ntBASIC23.8■■□□□ 1.4
TM4SF1P30408 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.8■■□□□ 1.4
TM4SF1P30408 GPALPP1-207ENST00000611650 899 ntBASIC23.8■■□□□ 1.4
TM4SF1P30408 AC006538.3-201ENST00000612495 578 ntBASIC23.8■■□□□ 1.4
TM4SF1P30408 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.8■■□□□ 1.4
TM4SF1P30408 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.8■■□□□ 1.4
TM4SF1P30408 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF1P30408 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.8■■□□□ 1.4
TM4SF1P30408 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TM4SF1P30408 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.79■■□□□ 1.4
TM4SF1P30408 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.79■■□□□ 1.4
TM4SF1P30408 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF1P30408 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.79■■□□□ 1.4
TM4SF1P30408 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF1P30408 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.79■■□□□ 1.4
TM4SF1P30408 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TM4SF1P30408 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.79■■□□□ 1.4
TM4SF1P30408 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TM4SF1P30408 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF1P30408 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
TM4SF1P30408 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF1P30408 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TM4SF1P30408 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF1P30408 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.78■■□□□ 1.4
TM4SF1P30408 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF1P30408 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 AC091304.2-201ENST00000564639 760 ntBASIC23.78■■□□□ 1.4
TM4SF1P30408 MIR3180-5-201ENST00000583743 153 ntBASIC23.78■■□□□ 1.4
TM4SF1P30408 AL136038.4-201ENST00000603606 1261 ntBASIC23.78■■□□□ 1.4
TM4SF1P30408 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.78■■□□□ 1.4
TM4SF1P30408 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF1P30408 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.78■■□□□ 1.4
TM4SF1P30408 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.78■■□□□ 1.4
TM4SF1P30408 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.78■■□□□ 1.4
TM4SF1P30408 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.78■■□□□ 1.4
TM4SF1P30408 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF1P30408 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TM4SF1P30408 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 AC106795.1-205ENST00000512851 1056 ntBASIC23.77■■□□□ 1.4
TM4SF1P30408 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.77■■□□□ 1.4
TM4SF1P30408 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF1P30408 MIR3917-201ENST00000580971 93 ntBASIC23.77■■□□□ 1.4
TM4SF1P30408 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.77■■□□□ 1.4
TM4SF1P30408 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF1P30408 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TM4SF1P30408 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF1P30408 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF1P30408 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF1P30408 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TM4SF1P30408 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms