Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
VARSP26640 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.77■□□□□ 0.6
VARSP26640 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
VARSP26640 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
VARSP26640 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.77■□□□□ 0.6
VARSP26640 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.77■□□□□ 0.6
VARSP26640 ECEL1P3-201ENST00000427961 737 ntBASIC18.77■□□□□ 0.6
VARSP26640 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 SNORA78-201ENST00000459373 127 ntBASIC18.77■□□□□ 0.6
VARSP26640 KRT18P16-201ENST00000510337 1294 ntBASIC18.77■□□□□ 0.6
VARSP26640 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.77■□□□□ 0.6
VARSP26640 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.77■□□□□ 0.6
VARSP26640 Z99916.2-201ENST00000604037 246 ntBASIC18.77■□□□□ 0.6
VARSP26640 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.77■□□□□ 0.6
VARSP26640 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VARSP26640 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VARSP26640 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.77■□□□□ 0.59
VARSP26640 NBPF21P-201ENST00000425093 1451 ntBASIC18.77■□□□□ 0.59
VARSP26640 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.77■□□□□ 0.59
VARSP26640 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VARSP26640 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
VARSP26640 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.76■□□□□ 0.59
VARSP26640 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VARSP26640 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
VARSP26640 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 AC211429.1-201ENST00000415277 523 ntBASIC18.76■□□□□ 0.59
VARSP26640 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VARSP26640 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.76■□□□□ 0.59
VARSP26640 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
VARSP26640 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VARSP26640 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 KRT8P8-201ENST00000434750 1448 ntBASIC18.75■□□□□ 0.59
VARSP26640 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.75■□□□□ 0.59
VARSP26640 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
VARSP26640 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 TUBB8P6-201ENST00000436895 1288 ntBASIC18.75■□□□□ 0.59
VARSP26640 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.75■□□□□ 0.59
VARSP26640 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.75■□□□□ 0.59
VARSP26640 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.75■□□□□ 0.59
VARSP26640 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VARSP26640 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.75■□□□□ 0.59
VARSP26640 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 LINC01465-201ENST00000408887 1940 ntBASIC18.74■□□□□ 0.59
VARSP26640 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 KRASP1-201ENST00000407852 552 ntBASIC18.74■□□□□ 0.59
VARSP26640 AC239809.2-201ENST00000415381 517 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms