Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC128676.1-201ENST00000454392 318 ntBASIC20.07■□□□□ 0.8
RARAP10276 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.07■□□□□ 0.8
RARAP10276 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.07■□□□□ 0.8
RARAP10276 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
RARAP10276 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RARAP10276 AC124016.1-201ENST00000609552 612 ntBASIC20.07■□□□□ 0.8
RARAP10276 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.07■□□□□ 0.8
RARAP10276 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.07■□□□□ 0.8
RARAP10276 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.07■□□□□ 0.8
RARAP10276 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.06■□□□□ 0.8
RARAP10276 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.06■□□□□ 0.8
RARAP10276 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 HLA-A-209ENST00000638375 975 ntBASIC20.06■□□□□ 0.8
RARAP10276 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RARAP10276 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.06■□□□□ 0.8
RARAP10276 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.06■□□□□ 0.8
RARAP10276 AC104581.1-202ENST00000635932 2618 ntBASIC20.06■□□□□ 0.8
RARAP10276 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.05■□□□□ 0.8
RARAP10276 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 AC133681.1-201ENST00000465482 601 ntBASIC20.05■□□□□ 0.8
RARAP10276 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RARAP10276 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.05■□□□□ 0.8
RARAP10276 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RARAP10276 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.04■□□□□ 0.8
RARAP10276 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.04■□□□□ 0.8
RARAP10276 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms