Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.31■□□□□ 0.68
SRPRAP08240 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.31■□□□□ 0.68
SRPRAP08240 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 AC117947.1-201ENST00000427448 529 ntBASIC19.31■□□□□ 0.68
SRPRAP08240 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.31■□□□□ 0.68
SRPRAP08240 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SRPRAP08240 AL031432.5-201ENST00000641059 760 ntBASIC19.31■□□□□ 0.68
SRPRAP08240 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.31■□□□□ 0.68
SRPRAP08240 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.31■□□□□ 0.68
SRPRAP08240 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
SRPRAP08240 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.31■□□□□ 0.68
SRPRAP08240 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRPRAP08240 Z82202.1-201ENST00000623446 1880 ntBASIC19.31■□□□□ 0.68
SRPRAP08240 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.3■□□□□ 0.68
SRPRAP08240 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.3■□□□□ 0.68
SRPRAP08240 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SRPRAP08240 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRPRAP08240 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.3■□□□□ 0.68
SRPRAP08240 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.3■□□□□ 0.68
SRPRAP08240 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRPRAP08240 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRPRAP08240 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 ARMC10P1-201ENST00000313754 855 ntBASIC19.29■□□□□ 0.68
SRPRAP08240 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SRPRAP08240 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.29■□□□□ 0.68
SRPRAP08240 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
SRPRAP08240 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.29■□□□□ 0.68
SRPRAP08240 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.29■□□□□ 0.68
SRPRAP08240 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 LINC01238-205ENST00000567549 1107 ntBASIC19.29■□□□□ 0.68
SRPRAP08240 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.29■□□□□ 0.68
SRPRAP08240 AC139887.4-201ENST00000607877 719 ntBASIC19.29■□□□□ 0.68
SRPRAP08240 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SRPRAP08240 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.29■□□□□ 0.68
SRPRAP08240 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRPRAP08240 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SRPRAP08240 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SRPRAP08240 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 KRT8P45-201ENST00000414328 1447 ntBASIC19.28■□□□□ 0.68
SRPRAP08240 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 RNF152P1-201ENST00000397754 604 ntBASIC19.28■□□□□ 0.68
SRPRAP08240 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.28■□□□□ 0.68
SRPRAP08240 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.28■□□□□ 0.68
SRPRAP08240 YBX1P2-201ENST00000489612 999 ntBASIC19.28■□□□□ 0.68
SRPRAP08240 AC063952.2-201ENST00000498792 1227 ntBASIC19.28■□□□□ 0.68
SRPRAP08240 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms