Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.29■□□□□ 0.68
RETP07949 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RETP07949 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.29■□□□□ 0.68
RETP07949 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.29■□□□□ 0.68
RETP07949 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.29■□□□□ 0.68
RETP07949 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.29■□□□□ 0.68
RETP07949 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.29■□□□□ 0.68
RETP07949 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
RETP07949 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RETP07949 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.29■□□□□ 0.68
RETP07949 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RETP07949 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
RETP07949 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.28■□□□□ 0.68
RETP07949 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RETP07949 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 AC112907.2-201ENST00000448639 330 ntBASIC19.28■□□□□ 0.68
RETP07949 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.28■□□□□ 0.68
RETP07949 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.28■□□□□ 0.68
RETP07949 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RETP07949 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.28■□□□□ 0.68
RETP07949 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.28■□□□□ 0.68
RETP07949 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.28■□□□□ 0.68
RETP07949 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RETP07949 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.28■□□□□ 0.68
RETP07949 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RETP07949 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RETP07949 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.27■□□□□ 0.68
RETP07949 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.27■□□□□ 0.68
RETP07949 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.27■□□□□ 0.68
RETP07949 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.27■□□□□ 0.68
RETP07949 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.27■□□□□ 0.68
RETP07949 TSPY21P-201ENST00000433481 731 ntBASIC19.27■□□□□ 0.68
RETP07949 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.27■□□□□ 0.68
RETP07949 TSPY23P-201ENST00000440136 739 ntBASIC19.27■□□□□ 0.68
RETP07949 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RETP07949 MIR3652-201ENST00000579335 131 ntBASIC19.27■□□□□ 0.68
RETP07949 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.27■□□□□ 0.68
RETP07949 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.27■□□□□ 0.68
RETP07949 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.27■□□□□ 0.68
RETP07949 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RETP07949 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RETP07949 AC018553.1-201ENST00000616682 1458 ntBASIC19.27■□□□□ 0.67
RETP07949 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RETP07949 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RETP07949 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.26■□□□□ 0.67
RETP07949 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RETP07949 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
RETP07949 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.26■□□□□ 0.67
RETP07949 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.26■□□□□ 0.67
RETP07949 AC004870.1-201ENST00000315132 882 ntBASIC19.26■□□□□ 0.67
RETP07949 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 PVRIG2P-201ENST00000435460 978 ntBASIC19.26■□□□□ 0.67
RETP07949 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.26■□□□□ 0.67
RETP07949 AC083849.1-201ENST00000615227 514 ntBASIC19.26■□□□□ 0.67
RETP07949 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.26■□□□□ 0.67
RETP07949 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RETP07949 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.26■□□□□ 0.67
RETP07949 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.26■□□□□ 0.67
RETP07949 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RETP07949 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RETP07949 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms