Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.01■■□□□ 1.27
CHGBP05060 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
CHGBP05060 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CHGBP05060 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23■■□□□ 1.27
CHGBP05060 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23■■□□□ 1.27
CHGBP05060 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23■■□□□ 1.27
CHGBP05060 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23■■□□□ 1.27
CHGBP05060 AC097493.4-201ENST00000641197 219 ntBASIC23■■□□□ 1.27
CHGBP05060 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23■■□□□ 1.27
CHGBP05060 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23■■□□□ 1.27
CHGBP05060 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23■■□□□ 1.27
CHGBP05060 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHGBP05060 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23■■□□□ 1.27
CHGBP05060 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.99■■□□□ 1.27
CHGBP05060 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.99■■□□□ 1.27
CHGBP05060 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CHGBP05060 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.99■■□□□ 1.27
CHGBP05060 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.99■■□□□ 1.27
CHGBP05060 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.99■■□□□ 1.27
CHGBP05060 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHGBP05060 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CHGBP05060 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.98■■□□□ 1.27
CHGBP05060 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.98■■□□□ 1.27
CHGBP05060 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
CHGBP05060 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.98■■□□□ 1.27
CHGBP05060 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.98■■□□□ 1.27
CHGBP05060 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.98■■□□□ 1.27
CHGBP05060 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHGBP05060 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CHGBP05060 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHGBP05060 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHGBP05060 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.98■■□□□ 1.27
CHGBP05060 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.98■■□□□ 1.27
CHGBP05060 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.98■■□□□ 1.27
CHGBP05060 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.97■■□□□ 1.27
CHGBP05060 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHGBP05060 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHGBP05060 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHGBP05060 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.97■■□□□ 1.27
CHGBP05060 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CHGBP05060 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CHGBP05060 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHGBP05060 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
CHGBP05060 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.97■■□□□ 1.27
CHGBP05060 ECEL1P2-202ENST00000465689 757 ntBASIC22.97■■□□□ 1.27
CHGBP05060 AC008622.2-201ENST00000617006 1229 ntBASIC22.97■■□□□ 1.27
CHGBP05060 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CHGBP05060 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.97■■□□□ 1.27
CHGBP05060 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHGBP05060 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.96■■□□□ 1.27
CHGBP05060 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.96■■□□□ 1.27
CHGBP05060 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.96■■□□□ 1.27
CHGBP05060 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.96■■□□□ 1.27
CHGBP05060 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.96■■□□□ 1.27
CHGBP05060 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.96■■□□□ 1.27
CHGBP05060 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.96■■□□□ 1.27
CHGBP05060 AL023803.3-201ENST00000615559 522 ntBASIC22.96■■□□□ 1.27
CHGBP05060 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
CHGBP05060 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CHGBP05060 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 LINC01568-207ENST00000641790 1380 ntBASIC22.96■■□□□ 1.27
CHGBP05060 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
CHGBP05060 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CHGBP05060 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CHGBP05060 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHGBP05060 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
CHGBP05060 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms