Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.01■□□□□ 0.47
CLPTM1O96005 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CLPTM1O96005 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLPTM1O96005 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLPTM1O96005 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CLPTM1O96005 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
CLPTM1O96005 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLPTM1O96005 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.01■□□□□ 0.47
CLPTM1O96005 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 OR6D1P-202ENST00000641007 5290 ntBASIC18■□□□□ 0.47
CLPTM1O96005 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18■□□□□ 0.47
CLPTM1O96005 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLPTM1O96005 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLPTM1O96005 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CLPTM1O96005 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18■□□□□ 0.47
CLPTM1O96005 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CLPTM1O96005 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18■□□□□ 0.47
CLPTM1O96005 AC120498.10-201ENST00000621827 505 ntBASIC18■□□□□ 0.47
CLPTM1O96005 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18■□□□□ 0.47
CLPTM1O96005 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18■□□□□ 0.47
CLPTM1O96005 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLPTM1O96005 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.99■□□□□ 0.47
CLPTM1O96005 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.99■□□□□ 0.47
CLPTM1O96005 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.99■□□□□ 0.47
CLPTM1O96005 KRT8P36-201ENST00000489121 1440 ntBASIC17.99■□□□□ 0.47
CLPTM1O96005 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.99■□□□□ 0.47
CLPTM1O96005 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLPTM1O96005 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.99■□□□□ 0.47
CLPTM1O96005 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.99■□□□□ 0.47
CLPTM1O96005 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.99■□□□□ 0.47
CLPTM1O96005 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLPTM1O96005 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLPTM1O96005 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLPTM1O96005 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 RARRES2P11-201ENST00000635158 484 ntBASIC17.98■□□□□ 0.47
CLPTM1O96005 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.98■□□□□ 0.47
CLPTM1O96005 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.98■□□□□ 0.47
CLPTM1O96005 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.98■□□□□ 0.47
CLPTM1O96005 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 FP475955.4-201ENST00000623131 1990 ntBASIC17.98■□□□□ 0.47
CLPTM1O96005 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms