Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP1O94782 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP1O94782 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP1O94782 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP1O94782 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP1O94782 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP1O94782 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.33■□□□□ 0.68
USP1O94782 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.33■□□□□ 0.68
USP1O94782 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.33■□□□□ 0.68
USP1O94782 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.33■□□□□ 0.68
USP1O94782 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.33■□□□□ 0.68
USP1O94782 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.33■□□□□ 0.68
USP1O94782 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
USP1O94782 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP1O94782 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.32■□□□□ 0.68
USP1O94782 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP1O94782 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.32■□□□□ 0.68
USP1O94782 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.32■□□□□ 0.68
USP1O94782 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.32■□□□□ 0.68
USP1O94782 TMEM191A-211ENST00000637163 1067 ntBASIC19.32■□□□□ 0.68
USP1O94782 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP1O94782 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
USP1O94782 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP1O94782 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
USP1O94782 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
USP1O94782 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.31■□□□□ 0.68
USP1O94782 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 AC120498.9-201ENST00000339021 3867 ntBASIC19.31■□□□□ 0.68
USP1O94782 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP1O94782 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP1O94782 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.31■□□□□ 0.68
USP1O94782 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP1O94782 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 TSPY20P-201ENST00000450910 630 ntBASIC19.31■□□□□ 0.68
USP1O94782 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.31■□□□□ 0.68
USP1O94782 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.31■□□□□ 0.68
USP1O94782 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.31■□□□□ 0.68
USP1O94782 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.31■□□□□ 0.68
USP1O94782 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP1O94782 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP1O94782 FEM1AP3-201ENST00000403722 1741 ntBASIC19.31■□□□□ 0.68
USP1O94782 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 NBPF21P-201ENST00000425093 1451 ntBASIC19.3■□□□□ 0.68
USP1O94782 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
USP1O94782 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.3■□□□□ 0.68
USP1O94782 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP1O94782 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms