Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 TUBB8P6-201ENST00000436895 1288 ntBASIC19.15■□□□□ 0.66
GPC4O75487 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GPC4O75487 RPPH1-201ENST00000516869 333 ntBASIC19.15■□□□□ 0.66
GPC4O75487 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 AC110285.5-201ENST00000611501 352 ntBASIC19.15■□□□□ 0.66
GPC4O75487 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC4O75487 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC4O75487 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC4O75487 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GPC4O75487 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC4O75487 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GPC4O75487 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GPC4O75487 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GPC4O75487 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GPC4O75487 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC4O75487 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.14■□□□□ 0.65
GPC4O75487 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 C1QBPP2-201ENST00000528754 825 ntBASIC19.14■□□□□ 0.65
GPC4O75487 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.14■□□□□ 0.65
GPC4O75487 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC4O75487 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
GPC4O75487 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 KRT8P8-201ENST00000434750 1448 ntBASIC19.14■□□□□ 0.65
GPC4O75487 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC4O75487 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC4O75487 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GPC4O75487 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 KRT16P5-201ENST00000455284 522 ntBASIC19.13■□□□□ 0.65
GPC4O75487 AC004264.1-201ENST00000608354 794 ntBASIC19.13■□□□□ 0.65
GPC4O75487 AL359736.2-201ENST00000621992 437 ntBASIC19.13■□□□□ 0.65
GPC4O75487 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.13■□□□□ 0.65
GPC4O75487 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GPC4O75487 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GPC4O75487 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC4O75487 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC4O75487 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC4O75487 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC4O75487 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GPC4O75487 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GPC4O75487 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GPC4O75487 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GPC4O75487 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC4O75487 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC4O75487 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC4O75487 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC4O75487 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
GPC4O75487 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms