Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SSX5O60225 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SSX5O60225 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.37■□□□□ 0.21
SSX5O60225 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 ZNRF2P3-201ENST00000424200 374 ntBASIC16.37■□□□□ 0.21
SSX5O60225 KRT18P11-201ENST00000435214 1283 ntBASIC16.37■□□□□ 0.21
SSX5O60225 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.37■□□□□ 0.21
SSX5O60225 DUX4L16-201ENST00000555130 1264 ntBASIC16.37■□□□□ 0.21
SSX5O60225 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SSX5O60225 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.37■□□□□ 0.21
SSX5O60225 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX5O60225 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.37■□□□□ 0.21
SSX5O60225 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX5O60225 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSX5O60225 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
SSX5O60225 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.36■□□□□ 0.21
SSX5O60225 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.36■□□□□ 0.21
SSX5O60225 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSX5O60225 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SSX5O60225 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.36■□□□□ 0.21
SSX5O60225 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.36■□□□□ 0.21
SSX5O60225 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SSX5O60225 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 Z98044.1-201ENST00000632503 1764 ntBASIC16.36■□□□□ 0.21
SSX5O60225 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX5O60225 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SSX5O60225 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 CYP2T1P-201ENST00000432607 1285 ntBASIC16.35■□□□□ 0.21
SSX5O60225 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.35■□□□□ 0.21
SSX5O60225 AL589743.5-201ENST00000616611 1050 ntBASIC16.35■□□□□ 0.21
SSX5O60225 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.35■□□□□ 0.21
SSX5O60225 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSX5O60225 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SSX5O60225 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.35■□□□□ 0.21
SSX5O60225 TFP1-202ENST00000475455 1573 ntBASIC16.34■□□□□ 0.21
SSX5O60225 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SSX5O60225 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
SSX5O60225 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.34■□□□□ 0.21
SSX5O60225 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSX5O60225 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms