Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN9O14815 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CAPN9O14815 MIR4785-201ENST00000585005 73 ntBASIC20.18■□□□□ 0.82
CAPN9O14815 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN9O14815 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CAPN9O14815 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN9O14815 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN9O14815 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN9O14815 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CAPN9O14815 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN9O14815 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN9O14815 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN9O14815 MIR1224-201ENST00000408193 85 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 AC026271.3-201ENST00000571884 352 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 MIR4497-201ENST00000583208 89 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 AC026471.5-201ENST00000615068 467 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN9O14815 KRT17P2-201ENST00000300992 1314 ntBASIC20.17■□□□□ 0.82
CAPN9O14815 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN9O14815 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN9O14815 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CAPN9O14815 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN9O14815 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN9O14815 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CAPN9O14815 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 SDHAP1-207ENST00000440850 2000 ntBASIC20.16■□□□□ 0.82
CAPN9O14815 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN9O14815 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN9O14815 NUDT16P1-203ENST00000513809 620 ntBASIC20.16■□□□□ 0.82
CAPN9O14815 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN9O14815 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.16■□□□□ 0.82
CAPN9O14815 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 AC093484.2-201ENST00000580996 2166 ntBASIC20.16■□□□□ 0.82
CAPN9O14815 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN9O14815 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN9O14815 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CAPN9O14815 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CAPN9O14815 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN9O14815 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CAPN9O14815 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CAPN9O14815 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN9O14815 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN9O14815 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN9O14815 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.15■□□□□ 0.82
CAPN9O14815 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.15■□□□□ 0.82
CAPN9O14815 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CAPN9O14815 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CAPN9O14815 Z82202.1-201ENST00000623446 1880 ntBASIC20.15■□□□□ 0.82
CAPN9O14815 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN9O14815 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN9O14815 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN9O14815 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CAPN9O14815 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CAPN9O14815 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CAPN9O14815 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN9O14815 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN9O14815 FSCN1P1-201ENST00000568912 1481 ntBASIC20.14■□□□□ 0.81
CAPN9O14815 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms