Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.44■□□□□ 0.54
CDX4O14627 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDX4O14627 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDX4O14627 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.44■□□□□ 0.54
CDX4O14627 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.44■□□□□ 0.54
CDX4O14627 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.44■□□□□ 0.54
CDX4O14627 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.44■□□□□ 0.54
CDX4O14627 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 AC117500.6-201ENST00000624871 588 ntBASIC18.44■□□□□ 0.54
CDX4O14627 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.44■□□□□ 0.54
CDX4O14627 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDX4O14627 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.44■□□□□ 0.54
CDX4O14627 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDX4O14627 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.44■□□□□ 0.54
CDX4O14627 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDX4O14627 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDX4O14627 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.43■□□□□ 0.54
CDX4O14627 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.43■□□□□ 0.54
CDX4O14627 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDX4O14627 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDX4O14627 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.43■□□□□ 0.54
CDX4O14627 MIR3917-201ENST00000580971 93 ntBASIC18.43■□□□□ 0.54
CDX4O14627 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.43■□□□□ 0.54
CDX4O14627 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 AL353801.3-201ENST00000609898 542 ntBASIC18.43■□□□□ 0.54
CDX4O14627 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.43■□□□□ 0.54
CDX4O14627 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDX4O14627 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDX4O14627 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDX4O14627 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDX4O14627 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.42■□□□□ 0.54
CDX4O14627 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDX4O14627 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 AL590627.1-203ENST00000421194 1026 ntBASIC18.42■□□□□ 0.54
CDX4O14627 AC104819.1-201ENST00000504587 486 ntBASIC18.42■□□□□ 0.54
CDX4O14627 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.42■□□□□ 0.54
CDX4O14627 MIR3180-5-201ENST00000583743 153 ntBASIC18.42■□□□□ 0.54
CDX4O14627 AC079834.2-201ENST00000609776 1949 ntBASIC18.42■□□□□ 0.54
CDX4O14627 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDX4O14627 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 AC009237.14-201ENST00000609975 1594 ntBASIC18.42■□□□□ 0.54
CDX4O14627 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDX4O14627 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDX4O14627 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
CDX4O14627 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
CDX4O14627 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.41■□□□□ 0.54
CDX4O14627 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDX4O14627 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 AC104417.2-201ENST00000562989 1793 ntBASIC18.41■□□□□ 0.54
CDX4O14627 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 TSPY12P-201ENST00000421279 868 ntBASIC18.41■□□□□ 0.54
CDX4O14627 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.41■□□□□ 0.54
CDX4O14627 AC138894.3-201ENST00000603787 634 ntBASIC18.41■□□□□ 0.54
CDX4O14627 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.41■□□□□ 0.54
CDX4O14627 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDX4O14627 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.4■□□□□ 0.54
CDX4O14627 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDX4O14627 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms