Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CCL21O00585 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCL21O00585 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL21O00585 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CCL21O00585 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL21O00585 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL21O00585 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL21O00585 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL21O00585 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL21O00585 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCL21O00585 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 AC016734.2-201ENST00000624325 1377 ntBASIC16.82■□□□□ 0.28
CCL21O00585 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL21O00585 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCL21O00585 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL21O00585 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL21O00585 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCL21O00585 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL21O00585 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
CCL21O00585 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.81■□□□□ 0.28
CCL21O00585 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL21O00585 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.81■□□□□ 0.28
CCL21O00585 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL21O00585 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL21O00585 AC104417.2-201ENST00000562989 1793 ntBASIC16.81■□□□□ 0.28
CCL21O00585 GPAT2P1-201ENST00000444924 1672 ntBASIC16.81■□□□□ 0.28
CCL21O00585 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL21O00585 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL21O00585 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCL21O00585 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL21O00585 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCL21O00585 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL21O00585 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCL21O00585 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL21O00585 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCL21O00585 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.8■□□□□ 0.28
CCL21O00585 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 AC036111.1-201ENST00000533973 1582 ntBASIC16.8■□□□□ 0.28
CCL21O00585 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL21O00585 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL21O00585 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms