Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA4O00483 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.68□□□□□ -0.06
NDUFA4O00483 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.68□□□□□ -0.06
NDUFA4O00483 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.68□□□□□ -0.06
NDUFA4O00483 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.68□□□□□ -0.06
NDUFA4O00483 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.68□□□□□ -0.06
NDUFA4O00483 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.68□□□□□ -0.06
NDUFA4O00483 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
NDUFA4O00483 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.68□□□□□ -0.06
NDUFA4O00483 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA4O00483 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA4O00483 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA4O00483 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA4O00483 TSPY23P-201ENST00000440136 739 ntBASIC14.67□□□□□ -0.06
NDUFA4O00483 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.67□□□□□ -0.06
NDUFA4O00483 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA4O00483 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NDUFA4O00483 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA4O00483 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NDUFA4O00483 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NDUFA4O00483 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.66□□□□□ -0.06
NDUFA4O00483 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.66□□□□□ -0.06
NDUFA4O00483 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.66□□□□□ -0.06
NDUFA4O00483 AC004951.3-201ENST00000418645 1148 ntBASIC14.66□□□□□ -0.06
NDUFA4O00483 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.66□□□□□ -0.06
NDUFA4O00483 PRSS44-201ENST00000515154 1146 ntBASIC14.66□□□□□ -0.06
NDUFA4O00483 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 TMEM191A-211ENST00000637163 1067 ntBASIC14.66□□□□□ -0.06
NDUFA4O00483 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NDUFA4O00483 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA4O00483 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA4O00483 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA4O00483 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms