Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 KRT16P1-201ENST00000399124 1418 ntBASIC18.24■□□□□ 0.51
RTCAO00442 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 IRX1P1-201ENST00000438849 1838 ntBASIC18.24■□□□□ 0.51
RTCAO00442 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 FAM197Y1-201ENST00000421178 764 ntBASIC18.24■□□□□ 0.51
RTCAO00442 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.24■□□□□ 0.51
RTCAO00442 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.24■□□□□ 0.51
RTCAO00442 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.24■□□□□ 0.51
RTCAO00442 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 AC073195.1-201ENST00000607241 877 ntBASIC18.24■□□□□ 0.51
RTCAO00442 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 AC131212.4-201ENST00000623606 975 ntBASIC18.24■□□□□ 0.51
RTCAO00442 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTCAO00442 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTCAO00442 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.24■□□□□ 0.51
RTCAO00442 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.23■□□□□ 0.51
RTCAO00442 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.23■□□□□ 0.51
RTCAO00442 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTCAO00442 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTCAO00442 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RTCAO00442 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RTCAO00442 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 RPS2P55-201ENST00000397318 883 ntBASIC18.22■□□□□ 0.51
RTCAO00442 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 AC107956.1-201ENST00000494359 873 ntBASIC18.22■□□□□ 0.51
RTCAO00442 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.22■□□□□ 0.51
RTCAO00442 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 Z99916.2-201ENST00000604037 246 ntBASIC18.22■□□□□ 0.51
RTCAO00442 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.22■□□□□ 0.51
RTCAO00442 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RTCAO00442 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RTCAO00442 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTCAO00442 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.22■□□□□ 0.51
RTCAO00442 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.21■□□□□ 0.51
RTCAO00442 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RTCAO00442 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.21■□□□□ 0.51
RTCAO00442 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.21■□□□□ 0.51
RTCAO00442 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.21■□□□□ 0.51
RTCAO00442 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTCAO00442 TSPY23P-201ENST00000440136 739 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms