Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 AC034232.1-201ENST00000506026 1064 ntBASIC18.7■□□□□ 0.58
C4orf47A7E2U8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 LINC01006-201ENST00000333319 2292 ntBASIC18.7■□□□□ 0.58
C4orf47A7E2U8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
C4orf47A7E2U8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 AL160237.2-201ENST00000556165 472 ntBASIC18.69■□□□□ 0.58
C4orf47A7E2U8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 AL732292.2-201ENST00000609649 430 ntBASIC18.69■□□□□ 0.58
C4orf47A7E2U8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf47A7E2U8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 SLC25A24-204ENST00000569674 2357 ntBASIC18.68■□□□□ 0.58
C4orf47A7E2U8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 AC104692.2-201ENST00000603054 253 ntBASIC18.68■□□□□ 0.58
C4orf47A7E2U8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf47A7E2U8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
C4orf47A7E2U8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 AC079776.4-201ENST00000511039 504 ntBASIC18.67■□□□□ 0.58
C4orf47A7E2U8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms