Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV5S1A1TA0A578 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AL135905.2-201ENST00000584934 1404 ntBASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 CD177P1-201ENST00000606252 935 ntBASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 MIR6786-201ENST00000616843 113 ntBASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AC011298.2-201ENST00000617989 482 ntBASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AC113410.3-201ENST00000623366 203 ntBASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBV5S1A1TA0A578 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 AC012618.2-201ENST00000428058 849 ntBASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 AC116562.2-201ENST00000507042 360 ntBASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV5S1A1TA0A578 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV5S1A1TA0A578 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 CKBP1-201ENST00000565489 1086 ntBASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 Z99916.2-201ENST00000604037 246 ntBASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 AP000692.2-201ENST00000608391 879 ntBASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.93■□□□□ 0.78
TCRBV5S1A1TA0A578 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms