Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col13a1Q9R1N9 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.75■□□□□ 0.75
Col13a1Q9R1N9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col13a1Q9R1N9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
Col13a1Q9R1N9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col13a1Q9R1N9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.74■□□□□ 0.75
Col13a1Q9R1N9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col13a1Q9R1N9 Gm14523-201ENSMUST00000117260 558 ntBASIC19.73■□□□□ 0.75
Col13a1Q9R1N9 Gm45364-201ENSMUST00000210883 159 ntBASIC19.73■□□□□ 0.75
Col13a1Q9R1N9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Col13a1Q9R1N9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col13a1Q9R1N9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col13a1Q9R1N9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col13a1Q9R1N9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.71■□□□□ 0.75
Col13a1Q9R1N9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col13a1Q9R1N9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.71■□□□□ 0.75
Col13a1Q9R1N9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col13a1Q9R1N9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col13a1Q9R1N9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col13a1Q9R1N9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col13a1Q9R1N9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col13a1Q9R1N9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col13a1Q9R1N9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Col13a1Q9R1N9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col13a1Q9R1N9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col13a1Q9R1N9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col13a1Q9R1N9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col13a1Q9R1N9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Col13a1Q9R1N9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col13a1Q9R1N9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col13a1Q9R1N9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col13a1Q9R1N9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col13a1Q9R1N9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col13a1Q9R1N9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col13a1Q9R1N9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col13a1Q9R1N9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col13a1Q9R1N9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col13a1Q9R1N9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col13a1Q9R1N9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col13a1Q9R1N9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col13a1Q9R1N9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col13a1Q9R1N9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.61■□□□□ 0.73
Col13a1Q9R1N9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col13a1Q9R1N9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Col13a1Q9R1N9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col13a1Q9R1N9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Col13a1Q9R1N9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col13a1Q9R1N9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col13a1Q9R1N9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col13a1Q9R1N9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col13a1Q9R1N9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col13a1Q9R1N9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col13a1Q9R1N9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col13a1Q9R1N9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col13a1Q9R1N9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.58■□□□□ 0.73
Col13a1Q9R1N9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col13a1Q9R1N9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Col13a1Q9R1N9 Gm5921-201ENSMUST00000075898 882 ntBASIC19.58■□□□□ 0.72
Col13a1Q9R1N9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col13a1Q9R1N9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col13a1Q9R1N9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col13a1Q9R1N9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.57■□□□□ 0.72
Col13a1Q9R1N9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col13a1Q9R1N9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col13a1Q9R1N9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col13a1Q9R1N9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col13a1Q9R1N9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col13a1Q9R1N9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.55■□□□□ 0.72
Col13a1Q9R1N9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.55■□□□□ 0.72
Col13a1Q9R1N9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col13a1Q9R1N9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Col13a1Q9R1N9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.54■□□□□ 0.72
Col13a1Q9R1N9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col13a1Q9R1N9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col13a1Q9R1N9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.53■□□□□ 0.72
Col13a1Q9R1N9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col13a1Q9R1N9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col13a1Q9R1N9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col13a1Q9R1N9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col13a1Q9R1N9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms