Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSMD1Q96PZ7 GUSBP5-201ENST00000418136 578 ntBASIC21.97■■□□□ 1.11
CSMD1Q96PZ7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.97■■□□□ 1.11
CSMD1Q96PZ7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSMD1Q96PZ7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSMD1Q96PZ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSMD1Q96PZ7 AC025884.2-201ENST00000553429 711 ntBASIC21.96■■□□□ 1.11
CSMD1Q96PZ7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSMD1Q96PZ7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSMD1Q96PZ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSMD1Q96PZ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSMD1Q96PZ7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSMD1Q96PZ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.95■■□□□ 1.1
CSMD1Q96PZ7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.95■■□□□ 1.1
CSMD1Q96PZ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSMD1Q96PZ7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSMD1Q96PZ7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSMD1Q96PZ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSMD1Q96PZ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CSMD1Q96PZ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.93■■□□□ 1.1
CSMD1Q96PZ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.93■■□□□ 1.1
CSMD1Q96PZ7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.93■■□□□ 1.1
CSMD1Q96PZ7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CSMD1Q96PZ7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CSMD1Q96PZ7 AC148477.6-201ENST00000623746 465 ntBASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CSMD1Q96PZ7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CSMD1Q96PZ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CSMD1Q96PZ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
CSMD1Q96PZ7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CSMD1Q96PZ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.89■■□□□ 1.1
CSMD1Q96PZ7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
CSMD1Q96PZ7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSMD1Q96PZ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.89■■□□□ 1.09
CSMD1Q96PZ7 AL157400.5-201ENST00000507624 621 ntBASIC21.89■■□□□ 1.09
CSMD1Q96PZ7 MIR219A2-201ENST00000608502 1504 ntBASIC21.89■■□□□ 1.09
CSMD1Q96PZ7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSMD1Q96PZ7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSMD1Q96PZ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSMD1Q96PZ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CSMD1Q96PZ7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 RP9P-202ENST00000450133 1212 ntBASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CSMD1Q96PZ7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSMD1Q96PZ7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CSMD1Q96PZ7 AL356441.2-201ENST00000443009 864 ntBASIC21.86■■□□□ 1.09
CSMD1Q96PZ7 AC010980.1-201ENST00000587192 1142 ntBASIC21.86■■□□□ 1.09
CSMD1Q96PZ7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSMD1Q96PZ7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CSMD1Q96PZ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSMD1Q96PZ7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.85■■□□□ 1.09
CSMD1Q96PZ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.85■■□□□ 1.09
CSMD1Q96PZ7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSMD1Q96PZ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CSMD1Q96PZ7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSMD1Q96PZ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSMD1Q96PZ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSMD1Q96PZ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.83■■□□□ 1.09
CSMD1Q96PZ7 AL592293.1-201ENST00000502889 1188 ntBASIC21.83■■□□□ 1.09
CSMD1Q96PZ7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CSMD1Q96PZ7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSMD1Q96PZ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.82■■□□□ 1.08
CSMD1Q96PZ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.82■■□□□ 1.08
CSMD1Q96PZ7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.82■■□□□ 1.08
CSMD1Q96PZ7 AC007029.1-201ENST00000604183 313 ntBASIC21.82■■□□□ 1.08
CSMD1Q96PZ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 DUX4L9-201ENST00000449051 1259 ntBASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.81■■□□□ 1.08
CSMD1Q96PZ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSMD1Q96PZ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSMD1Q96PZ7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSMD1Q96PZ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSMD1Q96PZ7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSMD1Q96PZ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 WHAMMP2-203ENST00000563942 1603 ntBASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSMD1Q96PZ7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.78■■□□□ 1.08
CSMD1Q96PZ7 AC103834.1-201ENST00000520383 144 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms