Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Scn10aQ6QIY3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Scn10aQ6QIY3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Scn10aQ6QIY3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.56■■■□□ 2
Scn10aQ6QIY3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.55■■■□□ 2
Scn10aQ6QIY3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
Scn10aQ6QIY3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Scn10aQ6QIY3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Scn10aQ6QIY3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.55■■■□□ 2
Scn10aQ6QIY3 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.54■■■□□ 2
Scn10aQ6QIY3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
Scn10aQ6QIY3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Scn10aQ6QIY3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
Scn10aQ6QIY3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Scn10aQ6QIY3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.51■■■□□ 2
Scn10aQ6QIY3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.51■■■□□ 2
Scn10aQ6QIY3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Scn10aQ6QIY3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scn10aQ6QIY3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Scn10aQ6QIY3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.49■■□□□ 1.99
Scn10aQ6QIY3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Scn10aQ6QIY3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn10aQ6QIY3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.47■■□□□ 1.99
Scn10aQ6QIY3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn10aQ6QIY3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn10aQ6QIY3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn10aQ6QIY3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn10aQ6QIY3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Scn10aQ6QIY3 Gm9812-201ENSMUST00000061934 968 ntBASIC27.46■■□□□ 1.99
Scn10aQ6QIY3 Gm5812-201ENSMUST00000061073 957 ntBASIC27.45■■□□□ 1.98
Scn10aQ6QIY3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Scn10aQ6QIY3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.44■■□□□ 1.98
Scn10aQ6QIY3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Scn10aQ6QIY3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.44■■□□□ 1.98
Scn10aQ6QIY3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Gm10420-201ENSMUST00000121713 882 ntBASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Scn10aQ6QIY3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scn10aQ6QIY3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scn10aQ6QIY3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scn10aQ6QIY3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.41■■□□□ 1.98
Scn10aQ6QIY3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Scn10aQ6QIY3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn10aQ6QIY3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.4■■□□□ 1.98
Scn10aQ6QIY3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Scn10aQ6QIY3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.39■■□□□ 1.98
Scn10aQ6QIY3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
Scn10aQ6QIY3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Scn10aQ6QIY3 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.39■■□□□ 1.97
Scn10aQ6QIY3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.39■■□□□ 1.97
Scn10aQ6QIY3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Scn10aQ6QIY3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Scn10aQ6QIY3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Scn10aQ6QIY3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Scn10aQ6QIY3 Gm5921-201ENSMUST00000075898 882 ntBASIC27.37■■□□□ 1.97
Scn10aQ6QIY3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Scn10aQ6QIY3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Scn10aQ6QIY3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.36■■□□□ 1.97
Scn10aQ6QIY3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn10aQ6QIY3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Scn10aQ6QIY3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn10aQ6QIY3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Scn10aQ6QIY3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Scn10aQ6QIY3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Scn10aQ6QIY3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.34■■□□□ 1.97
Scn10aQ6QIY3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Scn10aQ6QIY3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.33■■□□□ 1.97
Scn10aQ6QIY3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Scn10aQ6QIY3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn10aQ6QIY3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.32■■□□□ 1.96
Scn10aQ6QIY3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.31■■□□□ 1.96
Scn10aQ6QIY3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
Scn10aQ6QIY3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Scn10aQ6QIY3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.3■■□□□ 1.96
Scn10aQ6QIY3 Gm22567-201ENSMUST00000175542 342 ntBASIC27.3■■□□□ 1.96
Scn10aQ6QIY3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn10aQ6QIY3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.29■■□□□ 1.96
Scn10aQ6QIY3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scn10aQ6QIY3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scn10aQ6QIY3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Scn10aQ6QIY3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Scn10aQ6QIY3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Scn10aQ6QIY3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Scn10aQ6QIY3 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.27■■□□□ 1.96
Scn10aQ6QIY3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Scn10aQ6QIY3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn10aQ6QIY3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn10aQ6QIY3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms