Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHRFAM7AQ494W8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CHRFAM7AQ494W8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.93■■□□□ 1.1
CHRFAM7AQ494W8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRFAM7AQ494W8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.91■■□□□ 1.1
CHRFAM7AQ494W8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRFAM7AQ494W8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRFAM7AQ494W8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRFAM7AQ494W8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRFAM7AQ494W8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHRFAM7AQ494W8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRFAM7AQ494W8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.9■■□□□ 1.1
CHRFAM7AQ494W8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRFAM7AQ494W8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CHRFAM7AQ494W8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRFAM7AQ494W8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRFAM7AQ494W8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.88■■□□□ 1.09
CHRFAM7AQ494W8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRFAM7AQ494W8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRFAM7AQ494W8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHRFAM7AQ494W8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.86■■□□□ 1.09
CHRFAM7AQ494W8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.86■■□□□ 1.09
CHRFAM7AQ494W8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CHRFAM7AQ494W8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRFAM7AQ494W8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 AL121749.1-202ENST00000609313 2153 ntBASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRFAM7AQ494W8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 AC010864.1-201ENST00000609407 1511 ntBASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHRFAM7AQ494W8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRFAM7AQ494W8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRFAM7AQ494W8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRFAM7AQ494W8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHRFAM7AQ494W8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRFAM7AQ494W8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRFAM7AQ494W8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHRFAM7AQ494W8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRFAM7AQ494W8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRFAM7AQ494W8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRFAM7AQ494W8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRFAM7AQ494W8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRFAM7AQ494W8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRFAM7AQ494W8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRFAM7AQ494W8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRFAM7AQ494W8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRFAM7AQ494W8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHRFAM7AQ494W8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRFAM7AQ494W8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L13-201ENST00000554103 1267 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L15-201ENST00000611059 1267 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L23-201ENST00000615195 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L24-201ENST00000617576 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L22-201ENST00000618238 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L20-201ENST00000619712 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L21-201ENST00000622058 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L10-201ENST00000622460 1267 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 DUX4L25-201ENST00000624915 1269 ntBASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRFAM7AQ494W8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRFAM7AQ494W8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRFAM7AQ494W8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.75■■□□□ 1.07
CHRFAM7AQ494W8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms