Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 tA(AGC)DtA(AGC)D 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)FtA(AGC)F 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)GtA(AGC)G 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)HtA(AGC)H 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)JtA(AGC)J 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)K1tA(AGC)K1 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)K2tA(AGC)K2 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)LtA(AGC)L 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)M1tA(AGC)M1 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)M2tA(AGC)M2 73 nt6.53□□□□□ -1.36
SSU72P53538 tA(AGC)PtA(AGC)P 73 nt6.53□□□□□ -1.36
SSU72P53538 YNL140CYNL140C 570 nt6.53□□□□□ -1.36
SSU72P53538 TIF3YPR163C 1311 nt6.52□□□□□ -1.37
SSU72P53538 YCR025CYCR025C 411 nt6.52□□□□□ -1.37
SSU72P53538 FTH1YBR207W 1398 nt6.52□□□□□ -1.37
SSU72P53538 MEP1YGR121C 1479 nt6.52□□□□□ -1.37
SSU72P53538 BUD31YCR063W 474 nt6.51□□□□□ -1.37
SSU72P53538 INM1YHR046C 888 nt6.5□□□□□ -1.37
SSU72P53538 TDA4YJR116W 840 nt6.5□□□□□ -1.37
SSU72P53538 INO1YJL153C 1602 nt6.5□□□□□ -1.37
SSU72P53538 QCR6YFR033C 444 nt6.49□□□□□ -1.37
SSU72P53538 RCF1YML030W 480 nt6.49□□□□□ -1.37
SSU72P53538 TGL5YOR081C 2250 nt6.49□□□□□ -1.37
SSU72P53538 ABP1YCR088W 1779 nt6.49□□□□□ -1.37
SSU72P53538 ERG12YMR208W 1332 nt6.49□□□□□ -1.37
SSU72P53538 ERO1YML130C 1692 nt6.49□□□□□ -1.37
SSU72P53538 AIM3YBR108W 2844 nt6.48□□□□□ -1.37
SSU72P53538 YEL034C-AYEL034C-A 603 nt6.48□□□□□ -1.37
SSU72P53538 RCF2YNR018W 675 nt6.48□□□□□ -1.37
SSU72P53538 HXT9YJL219W 1704 nt6.47□□□□□ -1.37
SSU72P53538 RBS1YDL189W 1374 nt6.47□□□□□ -1.37
SSU72P53538 GLY1YEL046C 1164 nt6.47□□□□□ -1.37
SSU72P53538 MET22YOL064C 1074 nt6.47□□□□□ -1.37
SSU72P53538 WSC3YOL105C 1671 nt6.46□□□□□ -1.37
SSU72P53538 SEN2YLR105C 1134 nt6.46□□□□□ -1.38
SSU72P53538 FET4YMR319C 1659 nt6.45□□□□□ -1.38
SSU72P53538 YLL058WYLL058W 1728 nt6.45□□□□□ -1.38
SSU72P53538 HTS1YPR033C 1641 nt6.45□□□□□ -1.38
SSU72P53538 LRO1YNR008W 1986 nt6.45□□□□□ -1.38
SSU72P53538 EHT1YBR177C 1356 nt6.44□□□□□ -1.38
SSU72P53538 OCH1YGL038C 1443 nt6.44□□□□□ -1.38
SSU72P53538 SER2YGR208W 930 nt6.44□□□□□ -1.38
SSU72P53538 NAP1YKR048C 1254 nt6.44□□□□□ -1.38
SSU72P53538 YMR166CYMR166C 1107 nt6.44□□□□□ -1.38
SSU72P53538 PDC6YGR087C 1692 nt6.44□□□□□ -1.38
SSU72P53538 RHO1YPR165W 630 nt6.43□□□□□ -1.38
SSU72P53538 GYP8YFL027C 1494 nt6.42□□□□□ -1.38
SSU72P53538 YPT31YER031C 672 nt6.42□□□□□ -1.38
SSU72P53538 RNA170RNA170 169 nt6.42□□□□□ -1.38
SSU72P53538 CAK1YFL029C 1107 nt6.41□□□□□ -1.38
SSU72P53538 YGR210CYGR210C 1236 nt6.41□□□□□ -1.38
SSU72P53538 YJL064WYJL064W 396 nt6.41□□□□□ -1.38
SSU72P53538 MRP7YNL005C 1116 nt6.41□□□□□ -1.38
SSU72P53538 KTR4YBR199W 1395 nt6.41□□□□□ -1.38
SSU72P53538 PUP3YER094C 618 nt6.4□□□□□ -1.38
SSU72P53538 RRT14YIL127C 621 nt6.4□□□□□ -1.38
SSU72P53538 SSC1YJR045C 1965 nt6.4□□□□□ -1.39
SSU72P53538 THI73YLR004C 1572 nt6.4□□□□□ -1.39
SSU72P53538 VBA5YKR105C 1749 nt6.39□□□□□ -1.39
SSU72P53538 PPS1YBR276C 2424 nt6.39□□□□□ -1.39
SSU72P53538 MRN1YPL184C 1839 nt6.39□□□□□ -1.39
SSU72P53538 RRT6YGL146C 936 nt6.39□□□□□ -1.39
SSU72P53538 YHL030W-AYHL030W-A 462 nt6.39□□□□□ -1.39
SSU72P53538 PAU19YMR325W 375 nt6.39□□□□□ -1.39
SSU72P53538 DIP5YPL265W 1827 nt6.39□□□□□ -1.39
SSU72P53538 RPL2AYFR031C-A 765 nt6.38□□□□□ -1.39
SSU72P53538 YGR068W-AYGR068W-A 96 nt6.38□□□□□ -1.39
SSU72P53538 YHC3YJL059W 1227 nt6.38□□□□□ -1.39
SSU72P53538 YOR300WYOR300W 309 nt6.38□□□□□ -1.39
SSU72P53538 LSP1YPL004C 1026 nt6.38□□□□□ -1.39
SSU72P53538 BNA3YJL060W 1335 nt6.38□□□□□ -1.39
SSU72P53538 YOR389WYOR389W 1875 nt6.37□□□□□ -1.39
SSU72P53538 TPK1YJL164C 1194 nt6.37□□□□□ -1.39
SSU72P53538 YPL108WYPL108W 507 nt6.37□□□□□ -1.39
SSU72P53538 YER137CYER137C 447 nt6.36□□□□□ -1.39
SSU72P53538 HMS2YJR147W 1077 nt6.36□□□□□ -1.39
SSU72P53538 PRE10YOR362C 867 nt6.36□□□□□ -1.39
SSU72P53538 SGV1YPR161C 1974 nt6.35□□□□□ -1.39
SSU72P53538 MPA43YNL249C 1629 nt6.35□□□□□ -1.39
SSU72P53538 TGA1tA(UGC)A 73 nt6.34□□□□□ -1.39
SSU72P53538 tA(UGC)EtA(UGC)E 73 nt6.34□□□□□ -1.39
SSU72P53538 tA(UGC)GtA(UGC)G 73 nt6.34□□□□□ -1.39
SSU72P53538 tA(UGC)LtA(UGC)L 73 nt6.34□□□□□ -1.39
SSU72P53538 tA(UGC)OtA(UGC)O 73 nt6.34□□□□□ -1.39
SSU72P53538 YJR154WYJR154W 1041 nt6.34□□□□□ -1.39
SSU72P53538 PMU1YKL128C 888 nt6.34□□□□□ -1.39
SSU72P53538 YMR206WYMR206W 942 nt6.34□□□□□ -1.39
SSU72P53538 FCY1YPR062W 477 nt6.34□□□□□ -1.39
SSU72P53538 YPR084WYPR084W 1371 nt6.33□□□□□ -1.4
SSU72P53538 MEU1YLR017W 1014 nt6.33□□□□□ -1.4
SSU72P53538 WSC4YHL028W 1818 nt6.33□□□□□ -1.4
SSU72P53538 MKK1YOR231W 1527 nt6.33□□□□□ -1.4
SSU72P53538 ALG7YBR243C 1347 nt6.32□□□□□ -1.4
SSU72P53538 ARO3YDR035W 1113 nt6.32□□□□□ -1.4
SSU72P53538 EMP65YER140W 1671 nt6.32□□□□□ -1.4
SSU72P53538 ERP2YAL007C 648 nt6.31□□□□□ -1.4
SSU72P53538 HXT8YJL214W 1710 nt6.3□□□□□ -1.4
SSU72P53538 YCP4YCR004C 744 nt6.3□□□□□ -1.4
SSU72P53538 SNP1YIL061C 903 nt6.3□□□□□ -1.4
SSU72P53538 ECM30YLR436C 3825 nt6.3□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms