Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 tE(CUC)ItE(CUC)I 72 nt8.71□□□□□ -1.02
VPS53P47061 COS10YNR075W 1125 nt8.71□□□□□ -1.02
VPS53P47061 YIL168WYIL168W 384 nt8.7□□□□□ -1.02
VPS53P47061 ORT1YOR130C 879 nt8.7□□□□□ -1.02
VPS53P47061 HMT1YBR034C 1047 nt8.7□□□□□ -1.02
VPS53P47061 snR4snR4 186 nt8.7□□□□□ -1.02
VPS53P47061 YRF1-3YGR296W 5580 nt8.7□□□□□ -1.02
VPS53P47061 YRF1-6YNL339C 5580 nt8.7□□□□□ -1.02
VPS53P47061 YRF1-7YPL283C 5580 nt8.7□□□□□ -1.02
VPS53P47061 PMU1YKL128C 888 nt8.69□□□□□ -1.02
VPS53P47061 RHO1YPR165W 630 nt8.69□□□□□ -1.02
VPS53P47061 HXT11YOL156W 1704 nt8.68□□□□□ -1.02
VPS53P47061 YLR358CYLR358C 564 nt8.67□□□□□ -1.02
VPS53P47061 BUB2YMR055C 921 nt8.67□□□□□ -1.02
VPS53P47061 THI6YPL214C 1623 nt8.67□□□□□ -1.02
VPS53P47061 PSP2YML017W 1782 nt8.66□□□□□ -1.02
VPS53P47061 RRT6YGL146C 936 nt8.66□□□□□ -1.02
VPS53P47061 YPL071CYPL071C 471 nt8.65□□□□□ -1.02
VPS53P47061 FHN1YGR131W 525 nt8.64□□□□□ -1.03
VPS53P47061 ATG17YLR423C 1254 nt8.64□□□□□ -1.03
VPS53P47061 SRM1YGL097W 1449 nt8.63□□□□□ -1.03
VPS53P47061 ARP10YDR106W 855 nt8.63□□□□□ -1.03
VPS53P47061 MRS4YKR052C 915 nt8.63□□□□□ -1.03
VPS53P47061 YMC2YBR104W 990 nt8.63□□□□□ -1.03
VPS53P47061 THI73YLR004C 1572 nt8.63□□□□□ -1.03
VPS53P47061 KDX1YKL161C 1302 nt8.62□□□□□ -1.03
VPS53P47061 PUP3YER094C 618 nt8.62□□□□□ -1.03
VPS53P47061 YML079WYML079W 606 nt8.62□□□□□ -1.03
VPS53P47061 YBR056WYBR056W 1506 nt8.62□□□□□ -1.03
VPS53P47061 PUP2YGR253C 783 nt8.61□□□□□ -1.03
VPS53P47061 ADE16YLR028C 1776 nt8.61□□□□□ -1.03
VPS53P47061 UTP6YDR449C 1323 nt8.6□□□□□ -1.03
VPS53P47061 HAC1YFL031W 717 nt8.6□□□□□ -1.03
VPS53P47061 CPT1YNL130C 1182 nt8.6□□□□□ -1.03
VPS53P47061 YJL009WYJL009W 327 nt8.59□□□□□ -1.03
VPS53P47061 PRE10YOR362C 867 nt8.59□□□□□ -1.03
VPS53P47061 AAT1YKL106W 1356 nt8.59□□□□□ -1.03
VPS53P47061 TPN1YGL186C 1740 nt8.57□□□□□ -1.04
VPS53P47061 URA1YKL216W 945 nt8.57□□□□□ -1.04
VPS53P47061 SHC1YER096W 1539 nt8.57□□□□□ -1.04
VPS53P47061 TIM50YPL063W 1431 nt8.56□□□□□ -1.04
VPS53P47061 GNP1YDR508C 1992 nt8.56□□□□□ -1.04
VPS53P47061 SPR1YOR190W 1338 nt8.55□□□□□ -1.04
VPS53P47061 LAT1YNL071W 1449 nt8.55□□□□□ -1.04
VPS53P47061 JHD1YER051W 1479 nt8.55□□□□□ -1.04
VPS53P47061 YIL177CYIL177C 5277 nt8.54□□□□□ -1.04
VPS53P47061 MET30YIL046W 1923 nt8.53□□□□□ -1.04
VPS53P47061 PFS2YNL317W 1398 nt8.53□□□□□ -1.04
VPS53P47061 PNS1YOR161C 1620 nt8.53□□□□□ -1.04
VPS53P47061 HSV2YGR223C 1347 nt8.53□□□□□ -1.04
VPS53P47061 ALR1YOL130W 2580 nt8.52□□□□□ -1.05
VPS53P47061 FRA1YLL029W 2250 nt8.51□□□□□ -1.05
VPS53P47061 snR86snR86 1004 nt8.51□□□□□ -1.05
VPS53P47061 EHT1YBR177C 1356 nt8.5□□□□□ -1.05
VPS53P47061 SLM3YDL033C 1254 nt8.5□□□□□ -1.05
VPS53P47061 PIH1YHR034C 1035 nt8.5□□□□□ -1.05
VPS53P47061 YNL190WYNL190W 615 nt8.5□□□□□ -1.05
VPS53P47061 MEP1YGR121C 1479 nt8.5□□□□□ -1.05
VPS53P47061 SEM1YDR363W-A 270 nt8.49□□□□□ -1.05
VPS53P47061 YHL030W-AYHL030W-A 462 nt8.49□□□□□ -1.05
VPS53P47061 YAL019W-AYAL019W-A 570 nt8.49□□□□□ -1.05
VPS53P47061 SWP1YMR149W 861 nt8.49□□□□□ -1.05
VPS53P47061 LRO1YNR008W 1986 nt8.48□□□□□ -1.05
VPS53P47061 YNL165WYNL165W 1221 nt8.48□□□□□ -1.05
VPS53P47061 YLR072WYLR072W 2082 nt8.48□□□□□ -1.05
VPS53P47061 HXT8YJL214W 1710 nt8.47□□□□□ -1.05
VPS53P47061 DIA4YHR011W 1341 nt8.47□□□□□ -1.05
VPS53P47061 YOX1YML027W 1158 nt8.46□□□□□ -1.06
VPS53P47061 RCF1YML030W 480 nt8.46□□□□□ -1.06
VPS53P47061 LAS17YOR181W 1902 nt8.45□□□□□ -1.06
VPS53P47061 YBL111CYBL111C 2004 nt8.45□□□□□ -1.06
VPS53P47061 DOC1YGL240W 753 nt8.44□□□□□ -1.06
VPS53P47061 ATP23YNR020C 813 nt8.44□□□□□ -1.06
VPS53P47061 MDH2YOL126C 1134 nt8.44□□□□□ -1.06
VPS53P47061 APT1YML022W 564 nt8.43□□□□□ -1.06
VPS53P47061 AIM34YMR003W 597 nt8.43□□□□□ -1.06
VPS53P47061 TOM71YHR117W 1920 nt8.42□□□□□ -1.06
VPS53P47061 YJL144WYJL144W 315 nt8.41□□□□□ -1.06
VPS53P47061 ARG7YMR062C 1326 nt8.4□□□□□ -1.06
VPS53P47061 MAS2YHR024C 1449 nt8.39□□□□□ -1.07
VPS53P47061 BUD31YCR063W 474 nt8.39□□□□□ -1.07
VPS53P47061 DIP5YPL265W 1827 nt8.38□□□□□ -1.07
VPS53P47061 YOR111WYOR111W 699 nt8.38□□□□□ -1.07
VPS53P47061 LEA1YPL213W 717 nt8.38□□□□□ -1.07
VPS53P47061 CRN1YLR429W 1956 nt8.37□□□□□ -1.07
VPS53P47061 NCA3YJL116C 1014 nt8.37□□□□□ -1.07
VPS53P47061 PTH2YBL057C 627 nt8.37□□□□□ -1.07
VPS53P47061 WSC3YOL105C 1671 nt8.37□□□□□ -1.07
VPS53P47061 PMT7YDR307W 1989 nt8.36□□□□□ -1.07
VPS53P47061 CHA1YCL064C 1083 nt8.36□□□□□ -1.07
VPS53P47061 YGR137WYGR137W 375 nt8.36□□□□□ -1.07
VPS53P47061 AST1YBL069W 1290 nt8.35□□□□□ -1.07
VPS53P47061 NSG2YNL156C 900 nt8.35□□□□□ -1.07
VPS53P47061 HIS3YOR202W 663 nt8.35□□□□□ -1.07
VPS53P47061 NDE2YDL085W 1638 nt8.35□□□□□ -1.07
VPS53P47061 STS1YIR011C 960 nt8.34□□□□□ -1.07
VPS53P47061 SKG1YKR100C 1068 nt8.34□□□□□ -1.07
VPS53P47061 AAD14YNL331C 1131 nt8.34□□□□□ -1.07
VPS53P47061 MSI1YBR195C 1269 nt8.34□□□□□ -1.07
VPS53P47061 ABP1YCR088W 1779 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms