Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rab3dP35276 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab3dP35276 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab3dP35276 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab3dP35276 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rab3dP35276 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab3dP35276 Gm8109-201ENSMUST00000194076 746 ntBASIC19.33■□□□□ 0.68
Rab3dP35276 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab3dP35276 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab3dP35276 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rab3dP35276 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rab3dP35276 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.32■□□□□ 0.68
Rab3dP35276 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab3dP35276 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab3dP35276 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rab3dP35276 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab3dP35276 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rab3dP35276 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab3dP35276 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rab3dP35276 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab3dP35276 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab3dP35276 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab3dP35276 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab3dP35276 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab3dP35276 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rab3dP35276 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.28■□□□□ 0.68
Rab3dP35276 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.28■□□□□ 0.68
Rab3dP35276 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab3dP35276 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rab3dP35276 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab3dP35276 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.27■□□□□ 0.68
Rab3dP35276 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab3dP35276 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab3dP35276 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab3dP35276 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3dP35276 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab3dP35276 Gm16148-201ENSMUST00000119653 893 ntBASIC19.25■□□□□ 0.67
Rab3dP35276 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3dP35276 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3dP35276 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3dP35276 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.24■□□□□ 0.67
Rab3dP35276 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3dP35276 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3dP35276 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3dP35276 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab3dP35276 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3dP35276 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3dP35276 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3dP35276 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3dP35276 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3dP35276 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3dP35276 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3dP35276 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3dP35276 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3dP35276 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rab3dP35276 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab3dP35276 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab3dP35276 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab3dP35276 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab3dP35276 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab3dP35276 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rab3dP35276 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab3dP35276 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab3dP35276 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab3dP35276 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab3dP35276 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rab3dP35276 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab3dP35276 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab3dP35276 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab3dP35276 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rab3dP35276 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab3dP35276 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab3dP35276 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab3dP35276 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab3dP35276 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rab3dP35276 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab3dP35276 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab3dP35276 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab3dP35276 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab3dP35276 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rab3dP35276 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms