Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 EHT1YBR177C 1356 nt12.01□□□□□ -0.49
UFD4P33202 OPI7YDR360W 435 nt12.01□□□□□ -0.49
UFD4P33202 snR30snR30 606 nt12.01□□□□□ -0.49
UFD4P33202 OSM1YJR051W 1506 nt12□□□□□ -0.49
UFD4P33202 IMD1YAR073W 1212 nt12□□□□□ -0.49
UFD4P33202 KRR1YCL059C 951 nt11.99□□□□□ -0.49
UFD4P33202 AAT1YKL106W 1356 nt11.98□□□□□ -0.49
UFD4P33202 YPL136WYPL136W 369 nt11.98□□□□□ -0.49
UFD4P33202 TPN1YGL186C 1740 nt11.97□□□□□ -0.49
UFD4P33202 YLR030WYLR030W 792 nt11.97□□□□□ -0.49
UFD4P33202 ERG10YPL028W 1197 nt11.96□□□□□ -0.49
UFD4P33202 MDH1YKL085W 1005 nt11.95□□□□□ -0.5
UFD4P33202 CYT1YOR065W 930 nt11.95□□□□□ -0.5
UFD4P33202 TIF3YPR163C 1311 nt11.94□□□□□ -0.5
UFD4P33202 snR86snR86 1004 nt11.93□□□□□ -0.5
UFD4P33202 DPM1YPR183W 804 nt11.93□□□□□ -0.5
UFD4P33202 YJL225CYJL225C 5277 nt11.91□□□□□ -0.5
UFD4P33202 RRP43YCR035C 1185 nt11.9□□□□□ -0.5
UFD4P33202 STE3YKL178C 1413 nt11.9□□□□□ -0.5
UFD4P33202 SML1YML058W 315 nt11.9□□□□□ -0.5
UFD4P33202 YNL295WYNL295W 1575 nt11.9□□□□□ -0.5
UFD4P33202 TRP2YER090W 1524 nt11.9□□□□□ -0.51
UFD4P33202 SCS22YBL091C-A 528 nt11.89□□□□□ -0.51
UFD4P33202 MAE1YKL029C 2010 nt11.89□□□□□ -0.51
UFD4P33202 INH1YDL181W 258 nt11.89□□□□□ -0.51
UFD4P33202 MTO1YGL236C 2010 nt11.88□□□□□ -0.51
UFD4P33202 NAF1YNL124W 1479 nt11.88□□□□□ -0.51
UFD4P33202 HRB1YNL004W 1365 nt11.88□□□□□ -0.51
UFD4P33202 ALG7YBR243C 1347 nt11.88□□□□□ -0.51
UFD4P33202 YLR162WYLR162W 357 nt11.87□□□□□ -0.51
UFD4P33202 DIP5YPL265W 1827 nt11.86□□□□□ -0.51
UFD4P33202 PRY2YKR013W 990 nt11.84□□□□□ -0.51
UFD4P33202 INP54YOL065C 1155 nt11.84□□□□□ -0.51
UFD4P33202 FCY22YER060W-A 1593 nt11.84□□□□□ -0.51
UFD4P33202 FET5YFL041W 1869 nt11.84□□□□□ -0.51
UFD4P33202 NFS1YCL017C 1494 nt11.84□□□□□ -0.51
UFD4P33202 GLY1YEL046C 1164 nt11.83□□□□□ -0.52
UFD4P33202 YML122CYML122C 381 nt11.83□□□□□ -0.52
UFD4P33202 DCR2YLR361C 1737 nt11.83□□□□□ -0.52
UFD4P33202 OPI1YHL020C 1215 nt11.83□□□□□ -0.52
UFD4P33202 THI6YPL214C 1623 nt11.82□□□□□ -0.52
UFD4P33202 YDR387CYDR387C 1668 nt11.82□□□□□ -0.52
UFD4P33202 YKL153WYKL153W 510 nt11.82□□□□□ -0.52
UFD4P33202 MRPL35YDR322W 1104 nt11.8□□□□□ -0.52
UFD4P33202 SKP1YDR328C 585 nt11.79□□□□□ -0.52
UFD4P33202 DML1YMR211W 1428 nt11.79□□□□□ -0.52
UFD4P33202 BUD31YCR063W 474 nt11.78□□□□□ -0.52
UFD4P33202 SNP1YIL061C 903 nt11.78□□□□□ -0.52
UFD4P33202 MRPL19YNL185C 477 nt11.78□□□□□ -0.52
UFD4P33202 MNN9YPL050C 1188 nt11.78□□□□□ -0.52
UFD4P33202 INO1YJL153C 1602 nt11.78□□□□□ -0.52
UFD4P33202 DST1YGL043W 930 nt11.77□□□□□ -0.52
UFD4P33202 PIL1YGR086C 1020 nt11.77□□□□□ -0.52
UFD4P33202 SRM1YGL097W 1449 nt11.76□□□□□ -0.53
UFD4P33202 CPR2YHR057C 618 nt11.76□□□□□ -0.53
UFD4P33202 LIA1YJR070C 978 nt11.76□□□□□ -0.53
UFD4P33202 GPD1YDL022W 1176 nt11.75□□□□□ -0.53
UFD4P33202 PPZ2YDR436W 2133 nt11.75□□□□□ -0.53
UFD4P33202 SSC1YJR045C 1965 nt11.71□□□□□ -0.53
UFD4P33202 HXT11YOL156W 1704 nt11.71□□□□□ -0.53
UFD4P33202 DSC3YOR223W 879 nt11.7□□□□□ -0.54
UFD4P33202 WSC3YOL105C 1671 nt11.7□□□□□ -0.54
UFD4P33202 PAB1YER165W 1734 nt11.7□□□□□ -0.54
UFD4P33202 TPO4YOR273C 1980 nt11.7□□□□□ -0.54
UFD4P33202 YPR130CYPR130C 408 nt11.7□□□□□ -0.54
UFD4P33202 NBA1YOL070C 1506 nt11.67□□□□□ -0.54
UFD4P33202 YPT10YBR264C 600 nt11.67□□□□□ -0.54
UFD4P33202 FIT1YDR534C 1587 nt11.67□□□□□ -0.54
UFD4P33202 DRE2YKR071C 1047 nt11.66□□□□□ -0.54
UFD4P33202 YCL049CYCL049C 939 nt11.66□□□□□ -0.54
UFD4P33202 YOL046CYOL046C 675 nt11.65□□□□□ -0.54
UFD4P33202 FYV1YDR024W 486 nt11.63□□□□□ -0.55
UFD4P33202 HOC1YJR075W 1191 nt11.63□□□□□ -0.55
UFD4P33202 ILV6YCL009C 930 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)BtD(GUC)B 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)DtD(GUC)D 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)G1tD(GUC)G1 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)G2tD(GUC)G2 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)I1tD(GUC)I1 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)I2tD(GUC)I2 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)J1tD(GUC)J1 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)J2tD(GUC)J2 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)J3tD(GUC)J3 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)J4tD(GUC)J4 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)KtD(GUC)K 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)L1tD(GUC)L1 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)L2tD(GUC)L2 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)MtD(GUC)M 72 nt11.63□□□□□ -0.55
UFD4P33202 tD(GUC)OtD(GUC)O 72 nt11.63□□□□□ -0.55
UFD4P33202 YGR137WYGR137W 375 nt11.63□□□□□ -0.55
UFD4P33202 HAM1YJR069C 594 nt11.62□□□□□ -0.55
UFD4P33202 IMG1YCR046C 510 nt11.61□□□□□ -0.55
UFD4P33202 CIA1YDR267C 993 nt11.61□□□□□ -0.55
UFD4P33202 MTC6YHR151C 1581 nt11.61□□□□□ -0.55
UFD4P33202 YJL163CYJL163C 1668 nt11.61□□□□□ -0.55
UFD4P33202 YHR218W-AYHR218W-A 318 nt11.6□□□□□ -0.55
UFD4P33202 YBL112CYBL112C 318 nt11.6□□□□□ -0.55
UFD4P33202 ABP1YCR088W 1779 nt11.59□□□□□ -0.55
UFD4P33202 YIL029W-AYIL029W-A 372 nt11.59□□□□□ -0.55
UFD4P33202 NDE2YDL085W 1638 nt11.59□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 35.1 ms