Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 SAY1YGR263C 1275 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 YOL037CYOL037C 354 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 YOL106WYOL106W 354 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 YOL162WYOL162W 648 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 IFA38YBR159W 1044 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 YCL042WYCL042W 360 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 HOL1YNR055C 1761 nt8.7□□□□□ -1.02
TY1A-PR2P0CX60 ORM1YGR038W 669 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 VMA6YLR447C 1038 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 YOR062CYOR062C 807 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 STE4YOR212W 1272 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 ALG5YPL227C 1005 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 FRD1YEL047C 1413 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 PRP9YDL030W 1593 nt8.69□□□□□ -1.02
TY1A-PR2P0CX60 CBK1YNL161W 2271 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 MCM5YLR274W 2328 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 LSM6YDR378C 261 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 YEA6YEL006W 1008 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 HPM1YIL110W 1134 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 YKR051WYKR051W 1257 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 ADE1YAR015W 921 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 ERV25YML012W 636 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 LOA1YPR139C 903 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 YFL052WYFL052W 1398 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 YPL245WYPL245W 1365 nt8.68□□□□□ -1.02
TY1A-PR2P0CX60 POP6YGR030C 477 nt8.67□□□□□ -1.02
TY1A-PR2P0CX60 YLR307C-AYLR307C-A 264 nt8.67□□□□□ -1.02
TY1A-PR2P0CX60 POC4YPL144W 447 nt8.67□□□□□ -1.02
TY1A-PR2P0CX60 BSP1YPR171W 1731 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 MLS1YNL117W 1665 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 FEN2YCR028C 1539 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 SSU1YPL092W 1377 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 YPR084WYPR084W 1371 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 ERG24YNL280C 1317 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 YFL012WYFL012W 447 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 HIF1YLL022C 1158 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 CMS1YLR003C 876 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 SMM1YNR015W 1155 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 HMG2YLR450W 3138 nt8.66□□□□□ -1.02
TY1A-PR2P0CX60 EST3YIL009C-A 546 nt8.65□□□□□ -1.02
TY1A-PR2P0CX60 YKL202WYKL202W 582 nt8.65□□□□□ -1.02
TY1A-PR2P0CX60 YLL047WYLL047W 384 nt8.65□□□□□ -1.02
TY1A-PR2P0CX60 YHR175W-AYHR175W-A 150 nt8.64□□□□□ -1.03
TY1A-PR2P0CX60 URA5YML106W 681 nt8.64□□□□□ -1.03
TY1A-PR2P0CX60 FYV6YNL133C 522 nt8.64□□□□□ -1.03
TY1A-PR2P0CX60 YDC1YPL087W 954 nt8.64□□□□□ -1.03
TY1A-PR2P0CX60 ACO2YJL200C 2370 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 FMP45YDL222C 930 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 KSS1YGR040W 1107 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 CDC8YJR057W 651 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 YLR222C-AYLR222C-A 231 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 DIC1YLR348C 897 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 YGP1YNL160W 1065 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 IES2YNL215W 963 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 YPR153WYPR153W 423 nt8.63□□□□□ -1.03
TY1A-PR2P0CX60 CIT2YCR005C 1383 nt8.62□□□□□ -1.03
TY1A-PR2P0CX60 REV7YIL139C 738 nt8.62□□□□□ -1.03
TY1A-PR2P0CX60 YIR016WYIR016W 798 nt8.62□□□□□ -1.03
TY1A-PR2P0CX60 SCP1YOR367W 603 nt8.62□□□□□ -1.03
TY1A-PR2P0CX60 MET2YNL277W 1461 nt8.62□□□□□ -1.03
TY1A-PR2P0CX60 CHL4YDR254W 1377 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 YFT2YDR319C 825 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 YDR433WYDR433W 441 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 YDR524C-BYDR524C-B 201 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 PHM8YER037W 966 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 NMA2YGR010W 1188 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 OPI1YHL020C 1215 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 RPI1YIL119C 1224 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 AQY2YLL052C 450 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 YLR365WYLR365W 333 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 GPM3YOL056W 912 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 HFI1YPL254W 1467 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 SPO77YLR341W 1434 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 NPP1YCR026C 2229 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 MST1YKL194C 1389 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 CLB4YLR210W 1383 nt8.61□□□□□ -1.03
TY1A-PR2P0CX60 ARO10YDR380W 1908 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 APM4YOL062C 1476 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 SPC25YER018C 666 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 SNF4YGL115W 969 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 YGR291CYGR291C 222 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 CPR7YJR032W 1182 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 YNL174WYNL174W 573 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 YBR013CYBR013C 390 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 FSF1YOR271C 984 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 JID1YPR061C 906 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 YBR298C-AYBR298C-A 222 nt8.6□□□□□ -1.03
TY1A-PR2P0CX60 APM3YBR288C 1452 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 RTN2YDL204W 1182 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 BUD26YDR241W 288 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 EAF5YEL018W 840 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 MTC7YEL033W 420 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 KXD1YGL079W 657 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 PEX13YLR191W 1161 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 MSO1YNR049C 633 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 SRL4YPL033C 846 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 PSD1YNL169C 1503 nt8.59□□□□□ -1.03
TY1A-PR2P0CX60 YGL101WYGL101W 648 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 YLR379WYLR379W 375 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 BLS1YLR408C 369 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 57.3 ms