Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC36,51■■■■□ 3,44
Ccdc141E9Q8Q6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC36,51■■■■□ 3,44
Ccdc141E9Q8Q6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC36,5■■■■□ 3,43
Ccdc141E9Q8Q6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC36,49■■■■□ 3,43
Ccdc141E9Q8Q6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC36,49■■■■□ 3,43
Ccdc141E9Q8Q6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC36,49■■■■□ 3,43
Ccdc141E9Q8Q6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC36,49■■■■□ 3,43
Ccdc141E9Q8Q6 Gm9910-201ENSMUST00000195385 1550 ntBASIC36,49■■■■□ 3,43
Ccdc141E9Q8Q6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC36,48■■■■□ 3,43
Ccdc141E9Q8Q6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC36,47■■■■□ 3,43
Ccdc141E9Q8Q6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC36,47■■■■□ 3,43
Ccdc141E9Q8Q6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC36,46■■■■□ 3,43
Ccdc141E9Q8Q6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC36,45■■■■□ 3,43
Ccdc141E9Q8Q6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Ccdc141E9Q8Q6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC36,44■■■■□ 3,42
Ccdc141E9Q8Q6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Ccdc141E9Q8Q6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC36,44■■■■□ 3,42
Ccdc141E9Q8Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Ccdc141E9Q8Q6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC36,43■■■■□ 3,42
Ccdc141E9Q8Q6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC36,43■■■■□ 3,42
Ccdc141E9Q8Q6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC36,43■■■■□ 3,42
Ccdc141E9Q8Q6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC36,42■■■■□ 3,42
Ccdc141E9Q8Q6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC36,4■■■■□ 3,42
Ccdc141E9Q8Q6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC36,4■■■■□ 3,42
Ccdc141E9Q8Q6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC36,4■■■■□ 3,42
Ccdc141E9Q8Q6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC36,4■■■■□ 3,42
Ccdc141E9Q8Q6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC36,39■■■■□ 3,42
Ccdc141E9Q8Q6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC36,38■■■■□ 3,41
Ccdc141E9Q8Q6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC36,38■■■■□ 3,41
Ccdc141E9Q8Q6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC36,36■■■■□ 3,41
Ccdc141E9Q8Q6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC36,36■■■■□ 3,41
Ccdc141E9Q8Q6 Gm5067-201ENSMUST00000170449 1009 ntBASIC36,35■■■■□ 3,41
Ccdc141E9Q8Q6 Gm5812-201ENSMUST00000061073 957 ntBASIC36,35■■■■□ 3,41
Ccdc141E9Q8Q6 Gm9812-201ENSMUST00000061934 968 ntBASIC36,35■■■■□ 3,41
Ccdc141E9Q8Q6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC36,34■■■■□ 3,41
Ccdc141E9Q8Q6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC36,33■■■■□ 3,41
Ccdc141E9Q8Q6 Gm10420-201ENSMUST00000121713 882 ntBASIC36,33■■■■□ 3,41
Ccdc141E9Q8Q6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC36,33■■■■□ 3,41
Ccdc141E9Q8Q6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC36,33■■■■□ 3,41
Ccdc141E9Q8Q6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,41
Ccdc141E9Q8Q6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,4
Ccdc141E9Q8Q6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC36,31■■■■□ 3,4
Ccdc141E9Q8Q6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC36,31■■■■□ 3,4
Ccdc141E9Q8Q6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC36,3■■■■□ 3,4
Ccdc141E9Q8Q6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC36,29■■■■□ 3,4
Ccdc141E9Q8Q6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC36,29■■■■□ 3,4
Ccdc141E9Q8Q6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC36,29■■■■□ 3,4
Ccdc141E9Q8Q6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC36,27■■■■□ 3,4
Ccdc141E9Q8Q6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Gm22567-201ENSMUST00000175542 342 ntBASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC36,26■■■■□ 3,4
Ccdc141E9Q8Q6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC36,26■■■■□ 3,39
Ccdc141E9Q8Q6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC36,26■■■■□ 3,39
Ccdc141E9Q8Q6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC36,25■■■■□ 3,39
Ccdc141E9Q8Q6 Gm5921-201ENSMUST00000075898 882 ntBASIC36,25■■■■□ 3,39
Ccdc141E9Q8Q6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC36,25■■■■□ 3,39
Ccdc141E9Q8Q6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC36,25■■■■□ 3,39
Ccdc141E9Q8Q6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC36,24■■■■□ 3,39
Ccdc141E9Q8Q6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC36,24■■■■□ 3,39
Ccdc141E9Q8Q6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC36,24■■■■□ 3,39
Ccdc141E9Q8Q6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC36,24■■■■□ 3,39
Ccdc141E9Q8Q6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC36,24■■■■□ 3,39
Ccdc141E9Q8Q6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC36,23■■■■□ 3,39
Ccdc141E9Q8Q6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC36,23■■■■□ 3,39
Ccdc141E9Q8Q6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC36,23■■■■□ 3,39
Ccdc141E9Q8Q6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC36,23■■■■□ 3,39
Ccdc141E9Q8Q6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC36,22■■■■□ 3,39
Ccdc141E9Q8Q6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC36,21■■■■□ 3,39
Ccdc141E9Q8Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC36,21■■■■□ 3,39
Ccdc141E9Q8Q6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC36,21■■■■□ 3,39
Ccdc141E9Q8Q6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC36,21■■■■□ 3,39
Ccdc141E9Q8Q6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC36,21■■■■□ 3,39
Ccdc141E9Q8Q6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC36,2■■■■□ 3,39
Ccdc141E9Q8Q6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC36,2■■■■□ 3,39
Ccdc141E9Q8Q6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC36,18■■■■□ 3,38
Ccdc141E9Q8Q6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC36,18■■■■□ 3,38
Ccdc141E9Q8Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC36,17■■■■□ 3,38
Ccdc141E9Q8Q6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC36,16■■■■□ 3,38
Ccdc141E9Q8Q6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC36,15■■■■□ 3,38
Ccdc141E9Q8Q6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC36,15■■■■□ 3,38
Ccdc141E9Q8Q6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC36,15■■■■□ 3,38
Ccdc141E9Q8Q6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC36,15■■■■□ 3,38
Ccdc141E9Q8Q6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC36,15■■■■□ 3,38
Ccdc141E9Q8Q6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC36,14■■■■□ 3,38
Ccdc141E9Q8Q6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC36,14■■■■□ 3,38
Ccdc141E9Q8Q6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC36,12■■■■□ 3,37
Ccdc141E9Q8Q6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC36,12■■■■□ 3,37
Ccdc141E9Q8Q6 AC153911.1-201ENSMUST00000220378 758 ntBASIC36,11■■■■□ 3,37
Ccdc141E9Q8Q6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC36,1■■■■□ 3,37
Ccdc141E9Q8Q6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC36,08■■■■□ 3,37
Ccdc141E9Q8Q6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC36,08■■■■□ 3,37
Ccdc141E9Q8Q6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC36,07■■■■□ 3,36
Retrieved 100 of 76,532 protein–RNA pairs in 13,5 ms