Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13n-2A0A0G2JF93 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-2A0A0G2JF93 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.3■□□□□ 0.04
Trav13n-2A0A0G2JF93 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-2A0A0G2JF93 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-2A0A0G2JF93 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-2A0A0G2JF93 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-2A0A0G2JF93 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-2A0A0G2JF93 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-2A0A0G2JF93 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-2A0A0G2JF93 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-2A0A0G2JF93 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13n-2A0A0G2JF93 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-2A0A0G2JF93 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-2A0A0G2JF93 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-2A0A0G2JF93 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-2A0A0G2JF93 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13n-2A0A0G2JF93 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav13n-2A0A0G2JF93 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trav13n-2A0A0G2JF93 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-2A0A0G2JF93 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-2A0A0G2JF93 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13n-2A0A0G2JF93 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.24■□□□□ 0.03
Trav13n-2A0A0G2JF93 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Peli2-204ENSMUST00000226513 1320 ntBASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13n-2A0A0G2JF93 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav13n-2A0A0G2JF93 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13n-2A0A0G2JF93 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-2A0A0G2JF93 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13n-2A0A0G2JF93 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-2A0A0G2JF93 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13n-2A0A0G2JF93 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-2A0A0G2JF93 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-2A0A0G2JF93 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-2A0A0G2JF93 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-2A0A0G2JF93 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-2A0A0G2JF93 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-2A0A0G2JF93 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13n-2A0A0G2JF93 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13n-2A0A0G2JF93 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13n-2A0A0G2JF93 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-2A0A0G2JF93 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13n-2A0A0G2JF93 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms