Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 OR5H6-203ENST00000642105 978 ntBASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGB3Q9Y5G1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 Y_RNA.126-201ENST00000363382 111 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU6-960P-201ENST00000364056 120 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU4-40P-201ENST00000364351 143 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RNA5SP38-201ENST00000410750 119 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 ELOCP4-201ENST00000420090 333 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC092573.2-201ENST00000434546 243 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL36AP6-201ENST00000435770 321 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC006445.2-201ENST00000510061 472 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 RPL12P22-201ENST00000519073 490 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 IGHV3-76-201ENST00000522465 295 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 MIR5684-201ENST00000585074 65 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC022146.1-201ENST00000595307 847 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AC034229.5-201ENST00000624258 185 ntBASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB3Q9Y5G1 AL161912.2-201ENST00000565707 3007 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC073343.1-201ENST00000328239 651 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU6-817P-201ENST00000391083 104 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AL358472.1-201ENST00000431295 329 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 MTND4P32-201ENST00000437189 1237 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 ARPC3P1-201ENST00000437218 533 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 BNIP3P2-201ENST00000441221 577 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 RNA5SP143-201ENST00000516936 115 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 RNA5SP337-201ENST00000517007 109 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 MIR4286-201ENST00000580651 93 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC040904.1-201ENST00000590850 223 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC090578.1-201ENST00000604955 591 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC107294.1-201ENST00000609524 467 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC099778.2-201ENST00000610904 211 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 SNORA50A-202ENST00000629536 136 ntBASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB3Q9Y5G1 AC103988.1-201ENST00000566382 2177 ntBASIC3.78□□□□□ -1.81
PCDHGB3Q9Y5G1 AL359693.1-201ENST00000614959 2407 ntBASIC3.78□□□□□ -1.81
PCDHGB3Q9Y5G1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNU4-1-201ENST00000363925 141 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNY4P34-201ENST00000364779 95 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNU6-628P-201ENST00000410675 107 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RNU6-248P-201ENST00000410720 107 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 MTCO2P34-201ENST00000421994 607 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 AC009961.2-201ENST00000435771 251 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 AC083863.1-201ENST00000438811 231 ntBASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGB3Q9Y5G1 RPS4XP4-201ENST00000443195 763 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms