Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC125232.2-201ENST00000592457 143 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC108738.1-201ENST00000603703 237 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AL160281.1-201ENST00000605307 311 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC073869.10-201ENST00000642016 354 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 ZNF72P-201ENST00000425869 1908 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC010300.1-201ENST00000600671 5134 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC026523.2-201ENST00000625039 7739 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 ZNF285B-201ENST00000561698 1767 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NOD1Q9Y239 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NOD1Q9Y239 RNA5SP223-201ENST00000365174 120 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NOD1Q9Y239 RNU6-1156P-201ENST00000410365 100 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 RNU6-174P-201ENST00000410406 106 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC108032.1-201ENST00000416706 207 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 ARL5AP4-201ENST00000430731 512 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 AL360271.2-201ENST00000447710 161 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 CHEK2P4-201ENST00000450340 246 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 SUMO1P2-201ENST00000452524 304 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC022447.4-201ENST00000504053 364 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 GMPSP1-201ENST00000514075 579 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 SNORA40.14-201ENST00000516543 86 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 SNORA31.22-201ENST00000517204 135 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC087369.1-201ENST00000520775 996 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC040926.1-201ENST00000530195 238 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 MIR5188-201ENST00000583467 113 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC008745.1-201ENST00000604064 271 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NOD1Q9Y239 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
NOD1Q9Y239 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NOD1Q9Y239 AC008669.1-201ENST00000565823 2178 ntBASIC5.62□□□□□ -1.51
NOD1Q9Y239 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NOD1Q9Y239 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NOD1Q9Y239 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NOD1Q9Y239 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NOD1Q9Y239 Y_RNA.48-201ENST00000362710 103 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 RNU1-32P-201ENST00000363937 159 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 RNU6-596P-201ENST00000365395 98 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 RNU6-76P-201ENST00000384060 104 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 Y_RNA.461-201ENST00000384263 103 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 RNU6-472P-201ENST00000384299 107 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AL030996.1-201ENST00000411430 235 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 RPS15AP6-201ENST00000420703 385 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC099654.2-201ENST00000433031 1980 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 BNIP3P5-201ENST00000562290 498 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC005951.2-201ENST00000576282 495 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 MIR548AC-201ENST00000585049 88 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 BDH2P1-201ENST00000602288 736 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 MTND4LP5-201ENST00000605152 292 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 HMGB1P50-201ENST00000605814 607 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 AL591516.1-201ENST00000611326 274 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 EOGT-210ENST00000615922 1931 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC015967.1-201ENST00000619893 476 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.61□□□□□ -1.51
NOD1Q9Y239 AC125336.1-201ENST00000508893 2827 ntBASIC5.61□□□□□ -1.51
NOD1Q9Y239 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 AL355834.1-201ENST00000556602 3965 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.6□□□□□ -1.51
NOD1Q9Y239 SAMMSON-226ENST00000642089 1582 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AC083837.1-201ENST00000565297 2994 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NOD1Q9Y239 RNA5SP505-201ENST00000364748 108 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 RNU6-882P-201ENST00000391025 103 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 SNORA68.2-201ENST00000391263 128 ntBASIC5.6□□□□□ -1.51
NOD1Q9Y239 AF186996.5-201ENST00000418098 904 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms