Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 MTND5P34-201ENST00000568888 325 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 OR1F2P-201ENST00000570470 933 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 MIR548AC-201ENST00000585049 88 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC100757.1-201ENST00000616872 1835 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 AC016745.2-201ENST00000608834 3443 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-288P-201ENST00000363690 104 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNU1-130P-201ENST00000363930 160 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-76P-201ENST00000384060 104 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNA5SP339-201ENST00000390987 122 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-817P-201ENST00000391083 104 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RN7SL51P-201ENST00000468230 285 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RN7SL188P-201ENST00000469842 285 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 HMGN1P11-201ENST00000508668 303 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 SCARNA20.4-201ENST00000516969 131 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 RNA5SP373-201ENST00000517271 95 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 EDDM3DP-201ENST00000554692 434 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 CYP4F35P-202ENST00000636121 390 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 NCAPGP1-201ENST00000505112 1814 ntBASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM35Q9UPQ4 AP000547.3-204ENST00000588548 2523 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 U3.6-201ENST00000363622 211 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 RNU4-17P-201ENST00000365598 141 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-171P-201ENST00000384354 107 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 WARS2P1-201ENST00000429678 537 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 RNU7-107P-201ENST00000459121 61 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 RN7SL802P-201ENST00000577858 299 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 B3GNTL1P2-201ENST00000603673 288 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 AC007938.2-201ENST00000604666 2634 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 AL034549.2-201ENST00000618285 3373 ntBASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM35Q9UPQ4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-199P-201ENST00000362954 107 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-376P-201ENST00000384731 106 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 Y_RNA.570-201ENST00000384750 101 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RNU11-4P-201ENST00000391149 133 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 CYCSP6-201ENST00000434498 302 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 GSTM5P1-201ENST00000434751 660 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 Z82188.1-201ENST00000436709 154 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC073465.2-201ENST00000440938 498 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AL356981.1-201ENST00000454879 684 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC053481.1-201ENST00000467217 306 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC117440.1-201ENST00000474107 571 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RPS4XP1-201ENST00000482189 787 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-390P-201ENST00000516259 103 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC090022.1-201ENST00000546569 311 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 MIR4431-201ENST00000579990 94 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AC023043.3-201ENST00000593113 385 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RPL23AP88-201ENST00000605759 454 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-84P-201ENST00000607737 102 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 AL139124.1-201ENST00000609123 421 ntBASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM35Q9UPQ4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms