Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC008489.1-201ENST00000524271 483 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 RPL23AP84-201ENST00000571193 464 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 MIR4424-201ENST00000585257 86 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC020910.2-201ENST00000603635 610 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC104763.2-201ENST00000604179 382 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 MIR6716-201ENST00000613413 80 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL357559.1-201ENST00000622228 274 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC087190.4-201ENST00000574616 8334 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RNU6-335P-201ENST00000364563 113 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.509-201ENST00000384506 99 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RPL32P23-201ENST00000397237 405 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC097374.1-203ENST00000400783 485 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RPS20P15-201ENST00000412792 311 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 Z74021.1-201ENST00000423610 407 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RWDD4P2-201ENST00000426392 563 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 KCTD9P3-201ENST00000434597 1169 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RPL23AP2-201ENST00000471227 466 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC109327.1-201ENST00000471666 403 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 RNU6-677P-201ENST00000516914 101 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 NARSP2-201ENST00000518524 679 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC023575.1-201ENST00000580510 358 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 MIR3939-201ENST00000582614 106 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 BDH2P1-201ENST00000602288 736 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL138889.2-201ENST00000603883 242 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL670379.4-201ENST00000605279 254 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL365204.3-201ENST00000612448 685 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC004696.1-201ENST00000614345 607 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AC114781.5-201ENST00000615297 108 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 AL353748.2-201ENST00000622148 471 ntBASIC5.12□□□□□ -1.59
DDX41Q9UJV9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX41Q9UJV9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 SNORD74.4-201ENST00000364129 80 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL353678.1-201ENST00000422735 741 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 MTND1P14-201ENST00000427400 950 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RPL7L1P10-201ENST00000427790 463 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL451050.1-201ENST00000450126 415 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 NUTF2P7-201ENST00000453086 375 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL121877.1-201ENST00000453704 622 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RNU6-953P-201ENST00000459154 107 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RN7SL810P-201ENST00000493031 276 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RPS27AP13-201ENST00000498403 237 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 VWA8P1-201ENST00000510889 176 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RNU4-49P-201ENST00000516080 140 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AP006587.4-201ENST00000526053 529 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC005498.1-201ENST00000592125 465 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms