Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RPL26P9-201ENST00000457466 433 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RPS27AP10-201ENST00000496103 208 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 TMEM251P1-201ENST00000503717 318 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC026801.2-201ENST00000515352 425 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-352P-201ENST00000516908 107 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 CBX3P7-201ENST00000532876 502 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 NCAPGP2-201ENST00000557911 754 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 DEFB122-202ENST00000569013 197 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 MIR3200-201ENST00000580767 85 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AP000238.1-201ENST00000608759 426 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC010975.3-201ENST00000618727 978 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC026422.1-201ENST00000623961 452 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 U2.21-201ENST00000637295 81 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RLIMP1-201ENST00000339626 1680 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 MTND4P21-201ENST00000453886 1357 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF833P-201ENST00000424938 1494 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC008555.8-201ENST00000623602 2168 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 SNRPEP3-201ENST00000338402 276 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MIR218-1-201ENST00000384999 110 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RPL32P23-201ENST00000397237 405 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 DHFRP6-201ENST00000401776 268 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL356432.1-201ENST00000405809 419 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RNA5SP489-201ENST00000410986 109 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL161449.1-201ENST00000414531 1199 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 PGBD4P6-201ENST00000421501 610 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC007919.1-201ENST00000429380 217 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MED14P1-201ENST00000430517 648 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 GTF2IP7-202ENST00000436677 309 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC098831.1-201ENST00000440661 216 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MTCYBP11-201ENST00000447254 1109 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-775P-201ENST00000459318 96 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RPS20P20-201ENST00000460498 340 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC117440.1-201ENST00000474107 571 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC105137.1-201ENST00000484355 562 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC091167.1-201ENST00000492017 396 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC093281.2-201ENST00000510153 597 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-1261P-201ENST00000517194 104 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 RN7SKP92-201ENST00000517266 244 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL133241.1-201ENST00000556832 487 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC012435.1-202ENST00000568772 240 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC124283.4-201ENST00000581815 456 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC020914.6-201ENST00000594327 272 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC012468.1-201ENST00000604888 430 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AL158211.4-201ENST00000606988 584 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC106052.1-201ENST00000608029 497 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MIR7109-201ENST00000613748 65 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC104763.3-201ENST00000613765 618 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MIR6826-201ENST00000617808 98 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC024581.2-201ENST00000619986 252 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC084824.4-201ENST00000620106 731 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 OR1S1-201ENST00000624470 978 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF702P-202ENST00000434269 1966 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 AC069528.2-201ENST00000624849 1991 ntBASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
CDC42SE1Q9NRR8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNA5SP276-201ENST00000362580 94 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-778P-201ENST00000363269 103 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-997P-201ENST00000384725 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms