Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AL079343.1-201ENST00000572358 1771 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 RNU6-952P-201ENST00000391164 108 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 BX322784.1-201ENST00000455793 1077 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 FAM172BP-201ENST00000487497 1089 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC093752.1-206ENST00000511823 336 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC006499.2-201ENST00000513470 337 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 RNU6-714P-201ENST00000516963 103 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AL132657.2-201ENST00000564417 358 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 RPL23AP84-201ENST00000571193 464 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC005498.1-201ENST00000592125 465 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 BBIP1P1-201ENST00000602999 279 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC093838.1-201ENST00000613014 469 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC103798.2-201ENST00000624292 632 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC231657.1-201ENST00000624313 397 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AP003399.1-201ENST00000637534 361 ntBASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LRRC40Q9H9A6 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 SNORA18.3-201ENST00000384122 132 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RNU6-298P-201ENST00000390888 96 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AL138827.1-201ENST00000402666 306 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RNU2-25P-201ENST00000411041 191 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 Z75741.2-201ENST00000417272 1167 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AL358075.3-201ENST00000426289 226 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AL049734.2-201ENST00000441066 616 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 CBWD4P-201ENST00000445695 655 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 MRPL50P4-201ENST00000446432 475 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 SNORD121B-201ENST00000458838 81 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RPL30P9-201ENST00000465586 330 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RPL31P50-201ENST00000471002 296 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RN7SKP40-201ENST00000517211 242 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 SNORA70.24-201ENST00000517233 118 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RNU6-840P-201ENST00000517275 65 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC005832.3-201ENST00000537929 631 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 ELOCP31-201ENST00000540463 467 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AL445264.1-201ENST00000621719 171 ntBASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC40Q9H9A6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RNU6-1078P-201ENST00000364522 103 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RNU6-343P-201ENST00000364709 104 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 SNORA40.2-201ENST00000390847 128 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 SNORA40.4-201ENST00000390971 128 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AL590084.1-201ENST00000407885 387 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RNA5SP21-201ENST00000410917 96 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 BX119904.4-201ENST00000424402 301 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC087499.2-201ENST00000432861 149 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 GTF2IP3-201ENST00000433887 494 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 BNIP3P2-201ENST00000441221 577 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 FGF7P5-201ENST00000441829 291 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AL135938.1-201ENST00000443141 297 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AP1S2P1-201ENST00000457344 379 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC097493.1-201ENST00000463958 372 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RPS27AP9-201ENST00000477681 438 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC011825.1-201ENST00000484967 388 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 RPS15AP34-201ENST00000487776 387 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC138853.1-201ENST00000503549 823 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC113347.3-201ENST00000509113 148 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms