Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AP004242.1-201ENST00000533701 349 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 MED28P6-201ENST00000558776 231 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC00933-203ENST00000559812 219 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 RNU4ATAC-201ENST00000580972 127 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AC004805.3-201ENST00000603178 310 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AC024940.4-201ENST00000605507 246 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AC090132.2-201ENST00000615881 347 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AP001005.3-201ENST00000622049 129 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AC005514.1-201ENST00000623521 208 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 SMG1P4-204ENST00000523028 4131 ntBASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-1Q9BYR8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 AL033543.1-201ENST00000623440 13454 ntBASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-1Q9BYR8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-942P-201ENST00000363002 107 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 Y_RNA.309-201ENST00000365046 111 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 Y_RNA.329-201ENST00000365209 107 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC006461.1-201ENST00000412637 326 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 PPIAP23-201ENST00000420099 497 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC083855.1-201ENST00000440041 258 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RANP2-201ENST00000456833 229 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 snoU13.6-201ENST00000458785 104 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU7-197P-201ENST00000458836 62 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RPL30P12-201ENST00000474666 353 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RPS4XP13-201ENST00000483219 789 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC108145.1-201ENST00000503770 153 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC018645.1-201ENST00000505003 109 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC010343.2-201ENST00000510162 224 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 SNORA31.20-201ENST00000517111 133 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC090281.1-201ENST00000523019 276 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AP001328.1-201ENST00000528550 176 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC090049.2-201ENST00000550377 109 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 NACAP3-201ENST00000552100 481 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC005519.1-201ENST00000554490 601 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR4458-201ENST00000578872 75 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 LARP7P3-201ENST00000579888 337 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR4312-201ENST00000579909 76 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR132-201ENST00000591554 101 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AL589674.2-201ENST00000604304 337 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 U7.2-201ENST00000607576 63 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR3674-201ENST00000636576 68 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC000095.2-202ENST00000637415 154 ntBASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP3-1Q9BYR8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms