Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 VN1R104P-201ENST00000505115 1009 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC022616.3-201ENST00000523940 148 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC103843.2-201ENST00000530523 682 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC010928.3-201ENST00000587712 541 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 BRDTP1-201ENST00000605735 677 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC233309.1-201ENST00000619522 751 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 U4.6-201ENST00000621618 127 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 AL645937.1-201ENST00000641739 1652 ntBASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PAAF1Q9BRP4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 MTCO3P40-201ENST00000392516 676 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RPL21P24-201ENST00000413752 448 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 JKAMPP1-201ENST00000413804 919 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC017079.2-201ENST00000416102 485 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC140076.1-201ENST00000449897 361 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RBMY2UP-201ENST00000453474 324 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC004924.1-201ENST00000480160 781 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RPS3AP14-201ENST00000483907 780 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RNU6-64P-201ENST00000517119 105 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RPL21P12-201ENST00000559810 515 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AF038458.1-201ENST00000588406 262 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC006116.10-201ENST00000591836 581 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AL157786.1-207ENST00000627771 695 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 AC005832.2-201ENST00000538921 1430 ntBASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PAAF1Q9BRP4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC012020.1-201ENST00000624541 1728 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 OR5J1P-201ENST00000313544 939 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 SNORD56.2-201ENST00000363242 71 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 U3.11-201ENST00000364476 212 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RNA5SP167-201ENST00000365461 116 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 SNORA9-201ENST00000384215 133 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AL590002.1-201ENST00000406554 418 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RPS3AP24-201ENST00000407896 734 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 MTCYBP5-201ENST00000423752 1135 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC079780.1-201ENST00000428259 207 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC132479.1-201ENST00000449160 144 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 HMGB3P22-202ENST00000451823 572 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AL645939.1-201ENST00000453429 797 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RNU6-390P-201ENST00000516259 103 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RNU2-10P-201ENST00000516375 211 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 RNU6-840P-201ENST00000517275 65 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 FAM60DP-201ENST00000524174 632 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC109635.4-202ENST00000531666 412 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC128657.1-201ENST00000549459 145 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 TPRKBP2-201ENST00000565969 475 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 FAM60BP-201ENST00000578364 658 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms