Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU5F-8P-201ENST00000515941 111 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC104997.1-201ENST00000519761 717 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AP001646.1-201ENST00000527936 915 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 MIR3921-201ENST00000577308 85 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC018618.2-201ENST00000604770 446 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC025588.2-201ENST00000604851 466 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC007938.3-201ENST00000604965 623 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC097504.2-201ENST00000608088 454 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL590099.1-201ENST00000615276 138 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC090132.2-201ENST00000615881 347 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC025034.2-201ENST00000623264 286 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 OR1S1-201ENST00000624470 978 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC006386.2-201ENST00000624491 75 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC012005.1-201ENST00000624575 75 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC092608.3-201ENST00000625017 386 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC017104.5-201ENST00000637647 639 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 OR5H6-203ENST00000642105 978 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AL390862.1-201ENST00000635467 1469 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AL354685.2-201ENST00000448218 1447 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 RNU1-91P-201ENST00000364746 163 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 RNA5SP160-201ENST00000364866 120 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 RPS4XP8-201ENST00000402039 771 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC096664.2-201ENST00000411843 406 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 RPP40P1-201ENST00000426762 456 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 TAAR7P-201ENST00000436141 242 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 FABP5P3-201ENST00000437960 408 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 CYCSP32-201ENST00000440548 321 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC005002.1-201ENST00000447458 540 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC055855.1-201ENST00000489563 579 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC109464.2-201ENST00000510242 943 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC118465.1-201ENST00000513820 1271 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 RNA5SP281-201ENST00000516504 135 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC103783.1-201ENST00000520506 373 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 OR8K4P-201ENST00000534608 872 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC011611.5-201ENST00000552477 578 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC016542.1-201ENST00000608259 493 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AC020658.4-201ENST00000613987 684 ntBASIC1.52□□□□□ -2.17
AP1S3Q96PC3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
AP1S3Q96PC3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 DEFB108F-201ENST00000344638 222 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 SNORA11.4-201ENST00000408823 129 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 RPS7P9-201ENST00000414704 586 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 PAICSP7-201ENST00000419829 962 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC009237.2-201ENST00000421358 284 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 XKRYP1-201ENST00000423438 492 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 XKRYP2-201ENST00000432915 492 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC004383.1-201ENST00000438135 289 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AC016691.1-201ENST00000441321 413 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 AL118520.1-201ENST00000450770 291 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 PMCHL2-203ENST00000457791 237 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.51□□□□□ -2.17
AP1S3Q96PC3 RPL23AP41-201ENST00000484754 458 ntBASIC1.51□□□□□ -2.17
AP1S3Q96PC3 RNU4-29P-201ENST00000515943 174 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms