Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETREG2Q8NC44 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.6□□□□□ -1.51
RETREG2Q8NC44 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL672167.1-204ENST00000641875 3017 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 SNORA63-201ENST00000363450 132 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL360182.1-201ENST00000397433 468 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 MIR548K-201ENST00000408406 116 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 RNA5SP113-201ENST00000410486 84 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 VN1R36P-201ENST00000414936 291 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 CYP4F29P-201ENST00000420685 446 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AP000942.1-201ENST00000463969 747 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 RNU6-559P-201ENST00000516151 98 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 RNU6-1153P-201ENST00000516760 105 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 RNU6-1315P-201ENST00000517187 99 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 RNA5SP454-201ENST00000517231 127 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 NDUFB4P11-201ENST00000560510 395 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 MIR4284-201ENST00000578924 81 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL391358.1-201ENST00000605342 190 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL133255.1-201ENST00000606374 441 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AC008013.2-202ENST00000637965 364 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETREG2Q8NC44 AL133412.1-201ENST00000380194 2992 ntBASIC5.59□□□□□ -1.51
RETREG2Q8NC44 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RETREG2Q8NC44 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.59□□□□□ -1.52
RETREG2Q8NC44 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 RNU6-600P-201ENST00000362524 99 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 RNU6-395P-201ENST00000365662 106 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 RNU6-692P-201ENST00000384496 107 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 MIR298-201ENST00000401212 88 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 RPL37P10-201ENST00000412884 288 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC063979.1-201ENST00000415539 377 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 RPL21P109-201ENST00000422213 475 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AL592045.1-201ENST00000429867 352 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC005019.1-201ENST00000436455 431 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 OR1H1P-201ENST00000448731 937 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 SNORD19B-201ENST00000459623 84 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 HMGB1P30-201ENST00000492455 606 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC026979.1-201ENST00000492525 396 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 HMGB3P16-201ENST00000508037 287 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 SNORA70.16-201ENST00000516390 95 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC087854.1-201ENST00000519706 414 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AL161798.1-201ENST00000604630 131 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 Z99571.1-201ENST00000636677 394 ntBASIC5.58□□□□□ -1.52
RETREG2Q8NC44 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.58□□□□□ -1.52
RETREG2Q8NC44 ZNF285B-201ENST00000561698 1767 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RNU6-50P-201ENST00000362356 103 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RPS4XP7-201ENST00000406274 780 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 MIR548F5-201ENST00000408421 86 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 SNORA77-201ENST00000408716 125 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RNU2-33P-201ENST00000410344 192 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RN7SKP158-201ENST00000410453 326 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 Z85995.1-201ENST00000415547 335 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AF186996.5-201ENST00000418098 904 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 BX323845.1-201ENST00000432417 179 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 VDAC1P3-201ENST00000434069 851 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 snoU13.1-201ENST00000459157 104 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 RNU6-1088P-201ENST00000516850 104 ntBASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.57□□□□□ -1.52
RETREG2Q8NC44 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms