Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC023050.3-201ENST00000541142 333 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.29□□□□□ -1.56
USP48Q86UV5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP48Q86UV5 AC053481.4-201ENST00000583164 216 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.6-201ENST00000603753 252 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.11-201ENST00000604059 253 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC008162.1-201ENST00000604718 254 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.1-201ENST00000604752 252 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.5-201ENST00000605253 252 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.12-201ENST00000605291 253 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.8-201ENST00000605353 252 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AL670379.7-201ENST00000605823 252 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AC007390.2-201ENST00000606229 3803 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.29□□□□□ -1.56
USP48Q86UV5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP48Q86UV5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.29□□□□□ -1.56
USP48Q86UV5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.29□□□□□ -1.56
USP48Q86UV5 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.29□□□□□ -1.56
USP48Q86UV5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP48Q86UV5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP48Q86UV5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP48Q86UV5 CPHL1P-201ENST00000461341 3407 ntBASIC5.29□□□□□ -1.56
USP48Q86UV5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 AL645937.1-201ENST00000641739 1652 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AL139276.1-201ENST00000311910 1001 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 RNU6-188P-201ENST00000364207 107 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 Y_RNA.231-201ENST00000364358 102 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 MIR200C-201ENST00000384980 68 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 RNU6-903P-201ENST00000391270 109 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AL583834.1-201ENST00000406943 343 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 RNU2-43P-201ENST00000410306 190 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AL354751.2-201ENST00000415471 210 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 CRYBB2P1-203ENST00000415709 538 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 USP9YP20-201ENST00000419224 558 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.28□□□□□ -1.56
USP48Q86UV5 RPL35AP12-201ENST00000425362 338 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 TAAR7P-201ENST00000436141 242 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.28□□□□□ -1.56
USP48Q86UV5 MTND3P16-201ENST00000452205 344 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 RPS27AP13-201ENST00000498403 237 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AC004062.1-201ENST00000509926 645 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AP005639.2-201ENST00000527592 928 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AP005435.4-201ENST00000529514 284 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 OR5B10P-201ENST00000532869 642 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.28□□□□□ -1.56
USP48Q86UV5 MTND6P33-201ENST00000571794 183 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 MIR3944-201ENST00000581277 108 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 PART1_1.1-201ENST00000611761 217 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC093913.1-201ENST00000614178 329 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AP001486.3-201ENST00000615334 372 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC007546.1-201ENST00000619452 559 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC091905.2-201ENST00000623143 306 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC025034.2-201ENST00000623264 286 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC090617.10-201ENST00000624308 134 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 AC140479.6-201ENST00000633535 357 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 MIR4275-201ENST00000636486 87 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.28□□□□□ -1.56
USP48Q86UV5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 MAPK10-320ENST00000641462 6696 ntBASIC5.28□□□□□ -1.56
USP48Q86UV5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.28□□□□□ -1.56
USP48Q86UV5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.28□□□□□ -1.56
USP48Q86UV5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP48Q86UV5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.28□□□□□ -1.56
USP48Q86UV5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 TAB3P1-202ENST00000452645 1634 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP48Q86UV5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP48Q86UV5 RNU1-108P-201ENST00000362556 161 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RNU6-525P-201ENST00000363685 104 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RNA5SP130-201ENST00000364431 114 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 SNORD81.2-201ENST00000365153 76 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RNU6-692P-201ENST00000384496 107 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RPS12P23-201ENST00000419579 400 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RAC1P6-201ENST00000423911 575 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 DUTP6-201ENST00000425573 462 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AL365400.1-201ENST00000431854 640 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 ERLEC1P1-201ENST00000433806 578 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC004866.2-201ENST00000438285 481 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms