Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RN7SKP24-201ENST00000515888 284 ntBASIC3.57□□□□□ -1.84
NPHP3Q7Z494 RNY4P37-201ENST00000516225 96 ntBASIC3.57□□□□□ -1.84
NPHP3Q7Z494 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 LRRC34P1-201ENST00000542742 915 ntBASIC3.57□□□□□ -1.84
NPHP3Q7Z494 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 LARP7P2-201ENST00000575306 125 ntBASIC3.57□□□□□ -1.84
NPHP3Q7Z494 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
NPHP3Q7Z494 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 RNU6-50P-201ENST00000362356 103 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 U3.29-201ENST00000391296 212 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 SNRPEP2-201ENST00000397592 279 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 HMGB1P49-201ENST00000418882 569 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 FCF1P1-201ENST00000432690 571 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC092436.1-201ENST00000506450 503 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 HMGB1P28-201ENST00000507778 552 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 RNU6-27P-201ENST00000516146 107 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC010198.2-201ENST00000550612 259 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC097478.2-201ENST00000610572 514 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC021755.4-201ENST00000616620 456 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AC092650.2-201ENST00000619984 902 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AP000484.1-201ENST00000620067 1252 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AP000676.4-201ENST00000624659 623 ntBASIC3.56□□□□□ -1.84
NPHP3Q7Z494 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHP3Q7Z494 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AP000776.1-201ENST00000530032 1663 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CDR1-202ENST00000625883 1485 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 SNRPEP3-201ENST00000338402 276 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 RNU6-216P-201ENST00000363282 104 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 SNORA51.4-201ENST00000364993 124 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 DEFB109C-201ENST00000382575 264 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 DEFB109B-201ENST00000382656 264 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 NDUFB4P5-201ENST00000415445 361 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 SDCBPP3-201ENST00000419629 891 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 HIGD1AP2-201ENST00000446367 280 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 VN1R10P-201ENST00000447106 875 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AL353705.4-201ENST00000449661 238 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 MTCYBP17-201ENST00000503579 789 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 HIGD1AP17-201ENST00000554576 276 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AL158042.1-201ENST00000605338 460 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AC025754.2-201ENST00000606491 432 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AP002791.1-201ENST00000623291 381 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CYP3A51P-201ENST00000633513 256 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 AC007256.1-201ENST00000392253 2765 ntBASIC3.55□□□□□ -1.84
NPHP3Q7Z494 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP3Q7Z494 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 RPS3AP26-201ENST00000398259 784 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 MTND4P13-201ENST00000402078 1023 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 RNU6-757P-201ENST00000410334 100 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC092447.6-201ENST00000414578 210 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AL139421.1-201ENST00000423010 169 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 MTND3P1-201ENST00000441336 220 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AL139824.2-201ENST00000458731 1095 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 MTND1P16-201ENST00000465177 898 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 KLRA1P-201ENST00000503499 986 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC104090.1-201ENST00000506341 1171 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC034244.1-201ENST00000507687 207 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 RNU5A-4P-201ENST00000516588 111 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms