Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC025554.1-201ENST00000505641 188 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC109927.2-201ENST00000506416 303 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-1281P-201ENST00000516223 105 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC022968.1-201ENST00000567372 442 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 MIR432-201ENST00000606207 94 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AP001596.2-201ENST00000608410 312 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC007014.2-201ENST00000615581 479 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC048347.1-201ENST00000624621 427 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 U6.114-201ENST00000636407 96 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP175-201ENST00000364275 119 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP130-201ENST00000364431 114 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP306-201ENST00000411087 107 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AL451054.2-201ENST00000420896 202 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 MTCO1P20-201ENST00000425366 358 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 HMGB1P12-201ENST00000438594 598 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 NEFMP1-201ENST00000443423 1006 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AL162151.2-201ENST00000448875 158 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AL451050.1-201ENST00000450126 415 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-953P-201ENST00000459154 107 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC025445.1-201ENST00000502728 300 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 NRON-201ENST00000517270 370 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC023632.4-201ENST00000517783 191 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AP006587.4-201ENST00000526053 529 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AP001029.3-201ENST00000588063 596 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 BNIP3P22-201ENST00000593399 556 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC104763.2-201ENST00000604179 382 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 AC093788.1-201ENST00000609356 927 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 FAM27D1-201ENST00000612308 341 ntBASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC144BQ3MJ40 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC008568.2-201ENST00000623862 2313 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-188P-201ENST00000364207 107 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-483P-201ENST00000384088 108 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RN7SKP202-201ENST00000410439 330 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RNU2-37P-201ENST00000410695 177 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 SDCBPP3-201ENST00000419629 891 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 NDUFB4P7-201ENST00000423198 363 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RN7SL542P-201ENST00000467147 294 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 MTCO3P38-201ENST00000468910 766 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RPS4XP13-201ENST00000483219 789 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 RPS26P15-201ENST00000488067 348 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL592156.1-201ENST00000508758 304 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 FTH1P9-201ENST00000513251 355 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC099522.1-202ENST00000514718 367 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 SNORA70.16-201ENST00000516390 95 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 PHBP17-201ENST00000528576 541 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AK6P1-201ENST00000540219 478 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AP005205.1-201ENST00000563503 508 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC005951.2-201ENST00000576282 495 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 MIR4286-201ENST00000580651 93 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC104458.1-201ENST00000608243 463 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL365204.3-201ENST00000612448 685 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC144BQ3MJ40 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms