Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL161734.1-201ENST00000609720 557 ntBASIC4.06□□□□□ -1.76
NEK3P51956 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK3P51956 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK3P51956 UBE3AP2-201ENST00000429033 2259 ntBASIC4.06□□□□□ -1.76
NEK3P51956 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NEK3P51956 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEK3P51956 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK3P51956 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEK3P51956 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NEK3P51956 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK3P51956 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NEK3P51956 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NEK3P51956 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.05□□□□□ -1.76
NEK3P51956 AC073343.1-201ENST00000328239 651 ntBASIC4.05□□□□□ -1.76
NEK3P51956 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NEK3P51956 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NEK3P51956 SNORA11-201ENST00000408789 128 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK3P51956 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK3P51956 ISCA1P6-201ENST00000427740 390 ntBASIC4.05□□□□□ -1.76
NEK3P51956 OR2AS1P-201ENST00000427827 319 ntBASIC4.05□□□□□ -1.76
NEK3P51956 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK3P51956 AC104850.1-201ENST00000435940 476 ntBASIC4.05□□□□□ -1.76
NEK3P51956 HMGB3P12-201ENST00000438745 556 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AC122718.1-201ENST00000439448 744 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
NEK3P51956 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
NEK3P51956 RNA5SP310-201ENST00000459084 116 ntBASIC4.05□□□□□ -1.76
NEK3P51956 FAM133DP-201ENST00000464802 691 ntBASIC4.05□□□□□ -1.76
NEK3P51956 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NEK3P51956 MTND4LP31-201ENST00000514859 294 ntBASIC4.05□□□□□ -1.76
NEK3P51956 SNORA31.3-201ENST00000516029 96 ntBASIC4.05□□□□□ -1.76
NEK3P51956 RNU6-430P-201ENST00000517078 107 ntBASIC4.05□□□□□ -1.76
NEK3P51956 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK3P51956 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AC022616.3-201ENST00000523940 148 ntBASIC4.05□□□□□ -1.76
NEK3P51956 ARL2BPP2-201ENST00000550907 489 ntBASIC4.05□□□□□ -1.76
NEK3P51956 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK3P51956 MIR4474-201ENST00000579189 78 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK3P51956 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK3P51956 AC103987.3-201ENST00000582071 292 ntBASIC4.05□□□□□ -1.76
NEK3P51956 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK3P51956 AC174048.1-201ENST00000603389 144 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AC073648.5-201ENST00000603502 305 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AL592436.1-201ENST00000605135 558 ntBASIC4.05□□□□□ -1.76
NEK3P51956 AC091834.1-201ENST00000614543 472 ntBASIC4.05□□□□□ -1.76
NEK3P51956 CR848007.1-201ENST00000442354 1699 ntBASIC4.05□□□□□ -1.76
NEK3P51956 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK3P51956 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK3P51956 AC007785.2-201ENST00000598627 1916 ntBASIC4.05□□□□□ -1.76
NEK3P51956 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK3P51956 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
NEK3P51956 MIR423-201ENST00000362201 94 ntBASIC4.04□□□□□ -1.76
NEK3P51956 Y_RNA.359-201ENST00000365498 102 ntBASIC4.04□□□□□ -1.76
NEK3P51956 HMGN2P8-201ENST00000391458 268 ntBASIC4.04□□□□□ -1.76
NEK3P51956 NDUFS5P1-201ENST00000405668 289 ntBASIC4.04□□□□□ -1.76
NEK3P51956 Z85995.1-201ENST00000415547 335 ntBASIC4.04□□□□□ -1.76
NEK3P51956 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK3P51956 KCTD9P3-201ENST00000434597 1169 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 RPS29P7-201ENST00000439662 171 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK3P51956 AL590664.1-201ENST00000448065 339 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
NEK3P51956 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
NEK3P51956 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.04□□□□□ -1.76
NEK3P51956 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK3P51956 RNU6-352P-201ENST00000516908 107 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK3P51956 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
NEK3P51956 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.04□□□□□ -1.76
NEK3P51956 TRAV28-201ENST00000557548 323 ntBASIC4.04□□□□□ -1.76
NEK3P51956 MIR3167-201ENST00000579623 85 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AP002360.4-201ENST00000606980 481 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AL138880.2-201ENST00000616214 239 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AL732618.1-201ENST00000623251 301 ntBASIC4.04□□□□□ -1.76
NEK3P51956 AC027309.3-201ENST00000623419 351 ntBASIC4.04□□□□□ -1.76
NEK3P51956 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK3P51956 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEK3P51956 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEK3P51956 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
NEK3P51956 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NEK3P51956 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK3P51956 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NEK3P51956 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK3P51956 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK3P51956 NCAPGP1-201ENST00000505112 1814 ntBASIC4.03□□□□□ -1.76
NEK3P51956 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.03□□□□□ -1.76
NEK3P51956 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
NEK3P51956 OR5H15-201ENST00000383696 930 ntBASIC4.03□□□□□ -1.76
NEK3P51956 RNU5A-6P-201ENST00000384136 116 ntBASIC4.03□□□□□ -1.76
NEK3P51956 Y_RNA.582-201ENST00000391023 95 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms