Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC8P31273 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC8P31273 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC8P31273 CYCSP2-201ENST00000558168 301 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC8P31273 AC099489.2-201ENST00000574976 260 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC015917.1-201ENST00000579654 510 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC068790.2-201ENST00000602601 557 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AL033523.1-201ENST00000605153 153 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC012443.1-201ENST00000605605 231 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 HMGB1P50-201ENST00000605814 607 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AP002826.1-201ENST00000608835 315 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC008121.2-201ENST00000614647 523 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 AC090582.1-201ENST00000636321 199 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 DDX43P2-201ENST00000604753 1354 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC8P31273 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC8P31273 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
HOXC8P31273 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC8P31273 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC8P31273 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC8P31273 RNU4-21P-201ENST00000362802 126 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 RNA5SP88-201ENST00000365560 109 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC8P31273 SNORA54-201ENST00000384281 123 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 MIR1289-1-201ENST00000408836 144 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 RN7SKP142-201ENST00000411236 328 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 RPL21P32-201ENST00000419877 477 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 Z99497.1-201ENST00000421282 135 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL953862.1-201ENST00000423016 168 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL353706.1-201ENST00000436728 494 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 LARP1BP3-201ENST00000437229 869 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 NANOGNBP1-201ENST00000448444 480 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC8P31273 PAXBP1P1-201ENST00000449315 447 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 RPL30P9-201ENST00000465586 330 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC092104.1-201ENST00000497346 1441 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 ARL2BPP6-201ENST00000512757 439 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 MTND3P5-201ENST00000512798 333 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC239860.2-201ENST00000525886 270 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC8P31273 OR6C7P-201ENST00000547875 934 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC8P31273 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC8P31273 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC8P31273 AC006362.1-201ENST00000567392 174 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC012213.3-201ENST00000577199 777 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL596327.1-201ENST00000603629 213 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC092354.1-201ENST00000606057 376 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC8P31273 AC093732.2-201ENST00000607950 274 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 AC099778.2-201ENST00000610904 211 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL390240.1-201ENST00000612950 384 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AC100793.4-201ENST00000613683 429 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL162274.2-201ENST00000614406 332 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL353748.2-201ENST00000622148 471 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 AL356596.1-201ENST00000624230 379 ntBASIC3.57□□□□□ -1.84
HOXC8P31273 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
HOXC8P31273 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC8P31273 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC8P31273 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC8P31273 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC8P31273 AL161781.1-201ENST00000354277 403 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 RNU6-433P-201ENST00000363216 104 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 SNORA80A-201ENST00000363922 136 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 RNU1-140P-201ENST00000365040 165 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 RNU6-952P-201ENST00000391164 108 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AL136116.1-201ENST00000403591 381 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 RNU2-43P-201ENST00000410306 190 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 RPL23AP39-201ENST00000415533 405 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 BX890604.2-201ENST00000427883 474 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 SETP5-201ENST00000437270 562 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC8P31273 EEF1E1P1-201ENST00000446998 430 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC8P31273 USP9YP10-201ENST00000454868 628 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 BX322784.1-201ENST00000455793 1077 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC8P31273 AC107934.2-201ENST00000518653 310 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXC8P31273 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXC8P31273 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC8P31273 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC8P31273 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC8P31273 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC8P31273 MED28P6-201ENST00000558776 231 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 OR4K8P-201ENST00000578842 1048 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC8P31273 AC008507.1-201ENST00000587506 734 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AL451007.1-201ENST00000595491 289 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 BDH2P1-201ENST00000602288 736 ntBASIC3.56□□□□□ -1.84
HOXC8P31273 AC239868.4-201ENST00000608318 671 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms