Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ATF3P18847 OR5J1P-201ENST00000313544 939 ntBASIC4.56□□□□□ -1.68
ATF3P18847 Y_RNA.51-201ENST00000362725 102 ntBASIC4.56□□□□□ -1.68
ATF3P18847 Y_RNA.201-201ENST00000364052 96 ntBASIC4.56□□□□□ -1.68
ATF3P18847 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATF3P18847 RNU6-754P-201ENST00000391166 107 ntBASIC4.56□□□□□ -1.68
ATF3P18847 RN7SKP56-201ENST00000410513 331 ntBASIC4.56□□□□□ -1.68
ATF3P18847 Z99755.1-201ENST00000414048 380 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF3P18847 FTH1P1-201ENST00000437933 532 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 RPL23AP31-201ENST00000456160 467 ntBASIC4.56□□□□□ -1.68
ATF3P18847 RNU6-956P-201ENST00000458868 103 ntBASIC4.56□□□□□ -1.68
ATF3P18847 RPL21P104-201ENST00000464143 478 ntBASIC4.56□□□□□ -1.68
ATF3P18847 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF3P18847 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF3P18847 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 HMGB1P19-201ENST00000517578 577 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF3P18847 OR4T1P-201ENST00000554933 911 ntBASIC4.56□□□□□ -1.68
ATF3P18847 GTF3AP2-201ENST00000557014 266 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 VN1R79P-201ENST00000593540 513 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AC011468.4-201ENST00000603942 409 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AC064807.4-201ENST00000607201 407 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AL355472.4-201ENST00000610233 626 ntBASIC4.56□□□□□ -1.68
ATF3P18847 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF3P18847 AC108479.2-201ENST00000617314 601 ntBASIC4.56□□□□□ -1.68
ATF3P18847 AL138713.1-201ENST00000624026 2130 ntBASIC4.56□□□□□ -1.68
ATF3P18847 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATF3P18847 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
ATF3P18847 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATF3P18847 AC009812.4-201ENST00000569134 1805 ntBASIC4.56□□□□□ -1.68
ATF3P18847 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
ATF3P18847 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF3P18847 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF3P18847 MIR19A-201ENST00000384878 82 ntBASIC4.55□□□□□ -1.68
ATF3P18847 RNU4-65P-201ENST00000410473 140 ntBASIC4.55□□□□□ -1.68
ATF3P18847 HMGN1P14-201ENST00000412459 517 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF3P18847 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF3P18847 AC090774.1-201ENST00000435925 246 ntBASIC4.55□□□□□ -1.68
ATF3P18847 ATP5C1P1-201ENST00000441945 895 ntBASIC4.55□□□□□ -1.68
ATF3P18847 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF3P18847 AC092451.1-201ENST00000480211 153 ntBASIC4.55□□□□□ -1.68
ATF3P18847 RPS3AP50-201ENST00000487064 803 ntBASIC4.55□□□□□ -1.68
ATF3P18847 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF3P18847 AL133271.1-201ENST00000538229 291 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AL356432.3-201ENST00000568952 465 ntBASIC4.55□□□□□ -1.68
ATF3P18847 COX6CP3-201ENST00000580869 223 ntBASIC4.55□□□□□ -1.68
ATF3P18847 RSL24D1P11-201ENST00000591045 491 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF3P18847 AC087752.4-201ENST00000605911 462 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AL157817.1-201ENST00000614264 790 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AC112204.3-201ENST00000623822 332 ntBASIC4.55□□□□□ -1.68
ATF3P18847 AL603839.4-201ENST00000624658 1005 ntBASIC4.55□□□□□ -1.68
ATF3P18847 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF3P18847 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF3P18847 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF3P18847 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF3P18847 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF3P18847 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF3P18847 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF3P18847 RNU6-432P-201ENST00000384196 109 ntBASIC4.54□□□□□ -1.68
ATF3P18847 Y_RNA.553-201ENST00000384670 102 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AL445529.1-201ENST00000398713 389 ntBASIC4.54□□□□□ -1.68
ATF3P18847 RNU2-37P-201ENST00000410695 177 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF3P18847 USP9YP13-201ENST00000417797 480 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AC010153.1-201ENST00000432862 727 ntBASIC4.54□□□□□ -1.68
ATF3P18847 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF3P18847 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF3P18847 SSXP1-201ENST00000453640 473 ntBASIC4.54□□□□□ -1.68
ATF3P18847 MTCO2P18-201ENST00000457151 658 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AC114967.1-201ENST00000504890 259 ntBASIC4.54□□□□□ -1.68
ATF3P18847 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 MTND4P2-201ENST00000507767 1203 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AC022616.6-201ENST00000520479 119 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATF3P18847 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 BNIP3P8-201ENST00000597863 560 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC064872.1-201ENST00000604823 1072 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AL034351.1-201ENST00000605288 668 ntBASIC4.54□□□□□ -1.68
ATF3P18847 RN7SKP299-201ENST00000606679 301 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF3P18847 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF3P18847 AL159972.1-201ENST00000625150 448 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC090582.1-201ENST00000636321 199 ntBASIC4.54□□□□□ -1.68
ATF3P18847 AC010149.2-201ENST00000637608 315 ntBASIC4.54□□□□□ -1.68
ATF3P18847 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms