Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAPBO95292 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPBO95292 AC023424.2-201ENST00000493479 777 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AC008716.1-201ENST00000511084 513 ntBASIC2.38□□□□□ -2.03
VAPBO95292 RNU6-362P-201ENST00000516736 90 ntBASIC2.38□□□□□ -2.03
VAPBO95292 RPL7P20-201ENST00000520308 745 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AC068135.2-201ENST00000569293 1028 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AC009163.5-201ENST00000575421 637 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AC090616.3-201ENST00000582184 217 ntBASIC2.38□□□□□ -2.03
VAPBO95292 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPBO95292 AC079395.3-201ENST00000615161 484 ntBASIC2.38□□□□□ -2.03
VAPBO95292 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
VAPBO95292 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.38□□□□□ -2.03
VAPBO95292 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
VAPBO95292 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAPBO95292 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPBO95292 AL589826.1-201ENST00000340697 249 ntBASIC2.37□□□□□ -2.03
VAPBO95292 FTLP6-201ENST00000355274 422 ntBASIC2.37□□□□□ -2.03
VAPBO95292 RNU6-270P-201ENST00000364131 105 ntBASIC2.37□□□□□ -2.03
VAPBO95292 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAPBO95292 Z85995.1-201ENST00000415547 335 ntBASIC2.37□□□□□ -2.03
VAPBO95292 NDUFB4P7-201ENST00000423198 363 ntBASIC2.37□□□□□ -2.03
VAPBO95292 MTND2P5-201ENST00000432656 1006 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AL714022.1-201ENST00000439897 151 ntBASIC2.37□□□□□ -2.03
VAPBO95292 MTND2P24-201ENST00000453434 806 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AC116337.2-201ENST00000477662 156 ntBASIC2.37□□□□□ -2.03
VAPBO95292 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPBO95292 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPBO95292 MRPS36P2-201ENST00000512569 299 ntBASIC2.37□□□□□ -2.03
VAPBO95292 RNU6-1282P-201ENST00000516735 96 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AC023632.1-201ENST00000518463 375 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AP001189.2-201ENST00000527320 189 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPBO95292 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPBO95292 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPBO95292 AC234778.2-201ENST00000566241 354 ntBASIC2.37□□□□□ -2.03
VAPBO95292 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPBO95292 AP001521.1-201ENST00000609150 300 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPBO95292 AC004009.2-201ENST00000623016 728 ntBASIC2.37□□□□□ -2.03
VAPBO95292 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.37□□□□□ -2.03
VAPBO95292 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
VAPBO95292 AP003399.1-201ENST00000637534 361 ntBASIC2.37□□□□□ -2.03
VAPBO95292 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAPBO95292 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VAPBO95292 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VAPBO95292 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.36□□□□□ -2.03
VAPBO95292 RPL21P132-201ENST00000331267 462 ntBASIC2.36□□□□□ -2.03
VAPBO95292 SUGT1P1-201ENST00000379514 476 ntBASIC2.36□□□□□ -2.03
VAPBO95292 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
VAPBO95292 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VAPBO95292 RNU6-1300P-201ENST00000391046 108 ntBASIC2.36□□□□□ -2.03
VAPBO95292 ANAPC10P1-201ENST00000395991 556 ntBASIC2.36□□□□□ -2.03
VAPBO95292 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 AC099548.1-201ENST00000421443 426 ntBASIC2.36□□□□□ -2.03
VAPBO95292 RPL17P35-201ENST00000432217 549 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 FGF7P5-201ENST00000441829 291 ntBASIC2.36□□□□□ -2.03
VAPBO95292 MTCYBP3-201ENST00000445588 1137 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 OFD1P3Y-201ENST00000453312 783 ntBASIC2.36□□□□□ -2.03
VAPBO95292 MTCO3P11-201ENST00000455103 774 ntBASIC2.36□□□□□ -2.03
VAPBO95292 HSPE1P6-201ENST00000479457 291 ntBASIC2.36□□□□□ -2.03
VAPBO95292 LINC00888-204ENST00000487386 421 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AL049874.1-201ENST00000489560 388 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
VAPBO95292 OR4G11P-201ENST00000492842 939 ntBASIC2.36□□□□□ -2.03
VAPBO95292 RPL37P25-201ENST00000507308 276 ntBASIC2.36□□□□□ -2.03
VAPBO95292 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
VAPBO95292 SNORA31.18-201ENST00000517043 134 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 OR4R2P-201ENST00000530815 597 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 AC078814.3-201ENST00000553036 491 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC044913.1-201ENST00000557200 430 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 AC027176.1-201ENST00000560204 514 ntBASIC2.36□□□□□ -2.03
VAPBO95292 ZNF971P-201ENST00000562068 1249 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC090330.1-201ENST00000588646 764 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC013553.2-201ENST00000604244 589 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.36□□□□□ -2.03
VAPBO95292 AC090132.2-201ENST00000615881 347 ntBASIC2.36□□□□□ -2.03
VAPBO95292 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPBO95292 AL163152.1-201ENST00000642001 374 ntBASIC2.36□□□□□ -2.03
VAPBO95292 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VAPBO95292 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
VAPBO95292 AL049641.1-201ENST00000441055 1948 ntBASIC2.36□□□□□ -2.03
VAPBO95292 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
VAPBO95292 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VAPBO95292 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPBO95292 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
VAPBO95292 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.35□□□□□ -2.03
VAPBO95292 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
VAPBO95292 RNU6-609P-201ENST00000365459 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms