Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PTCD1O75127 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCD1O75127 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCD1O75127 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCD1O75127 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCD1O75127 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCD1O75127 RNU6-1188P-201ENST00000363795 107 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC019155.1-201ENST00000382242 574 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 RNU1-13P-201ENST00000384499 162 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCD1O75127 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 MTCYBP10-201ENST00000424905 650 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 RPL12P46-201ENST00000436610 195 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCD1O75127 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC008481.1-201ENST00000463278 396 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCD1O75127 MTCYBP40-201ENST00000509390 1135 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 RNA5SP249-201ENST00000516127 99 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC022790.1-201ENST00000522872 204 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC135001.1-201ENST00000544546 283 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCD1O75127 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC034105.4-201ENST00000568304 277 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 SNHG22-203ENST00000617833 660 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 EIF2AP4-201ENST00000424793 1781 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCD1O75127 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCD1O75127 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PTCD1O75127 AC011755.1-201ENST00000623763 2049 ntBASIC5.79□□□□□ -1.48
PTCD1O75127 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCD1O75127 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 MTND5P10-201ENST00000603719 1809 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 CPHL1P-201ENST00000461341 3407 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 RNU1-94P-201ENST00000362627 173 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 Y_RNA.257-201ENST00000364596 102 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 RNU6-946P-201ENST00000383878 107 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCD1O75127 CALM2P2-201ENST00000428512 440 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 RPL23AP89-201ENST00000439324 255 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL359073.1-201ENST00000448036 403 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 RPS15AP27-201ENST00000449183 343 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCD1O75127 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 HIGD1AP13-201ENST00000509878 289 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 TBCAP3-201ENST00000512475 312 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AC103783.1-201ENST00000520506 373 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCD1O75127 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCD1O75127 AC125257.1-201ENST00000560400 2930 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 AC008521.1-201ENST00000587471 187 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AF038458.1-201ENST00000588406 262 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCD1O75127 AL670379.6-201ENST00000603753 252 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL670379.1-201ENST00000604752 252 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AC113403.1-201ENST00000604910 193 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL670379.5-201ENST00000605253 252 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL670379.8-201ENST00000605353 252 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 ATP1B3P1-201ENST00000605365 821 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL158032.1-201ENST00000605401 106 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 AL670379.7-201ENST00000605823 252 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 TUG1_2.1-201ENST00000614234 87 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 SNX18P1Y-201ENST00000616231 511 ntBASIC5.78□□□□□ -1.48
PTCD1O75127 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCD1O75127 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTCD1O75127 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCD1O75127 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCD1O75127 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
PTCD1O75127 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PTCD1O75127 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCD1O75127 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCD1O75127 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PTCD1O75127 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCD1O75127 MIR133A2-201ENST00000347538 102 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 MIR383-201ENST00000362257 73 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 Y_RNA.112-201ENST00000363250 102 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 RNU6-601P-201ENST00000384540 107 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 Y_RNA.527-201ENST00000384573 102 ntBASIC5.77□□□□□ -1.49
PTCD1O75127 AL080315.1-201ENST00000406055 466 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms