Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
MSH5O43196 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MSH5O43196 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MSH5O43196 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 AC007938.2-201ENST00000604666 2634 ntBASIC9.06□□□□□ -0.96
MSH5O43196 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
MSH5O43196 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC9.06□□□□□ -0.96
MSH5O43196 RNU6-509P-201ENST00000363519 107 ntBASIC9.06□□□□□ -0.96
MSH5O43196 RNU4-41P-201ENST00000364426 143 ntBASIC9.06□□□□□ -0.96
MSH5O43196 RNA5SP85-201ENST00000365378 119 ntBASIC9.06□□□□□ -0.96
MSH5O43196 DYNLT3P1-201ENST00000378574 347 ntBASIC9.06□□□□□ -0.96
MSH5O43196 RNU6-166P-201ENST00000384371 107 ntBASIC9.06□□□□□ -0.96
MSH5O43196 MIR1912-201ENST00000410389 80 ntBASIC9.06□□□□□ -0.96
MSH5O43196 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 RPL23AP46-201ENST00000438548 490 ntBASIC9.06□□□□□ -0.96
MSH5O43196 AC005017.1-201ENST00000482002 490 ntBASIC9.06□□□□□ -0.96
MSH5O43196 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC9.06□□□□□ -0.96
MSH5O43196 AC005912.1-201ENST00000495392 255 ntBASIC9.06□□□□□ -0.96
MSH5O43196 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC9.06□□□□□ -0.96
MSH5O43196 EEF1B2P1-201ENST00000567221 672 ntBASIC9.06□□□□□ -0.96
MSH5O43196 AL021707.8-201ENST00000609428 183 ntBASIC9.06□□□□□ -0.96
MSH5O43196 AC005514.1-201ENST00000623521 208 ntBASIC9.06□□□□□ -0.96
MSH5O43196 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
MSH5O43196 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
MSH5O43196 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC9.06□□□□□ -0.96
MSH5O43196 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MSH5O43196 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 AC005618.1-201ENST00000606901 3148 ntBASIC9.05□□□□□ -0.96
MSH5O43196 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC9.05□□□□□ -0.96
MSH5O43196 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MSH5O43196 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 ACEA_U3.1-201ENST00000363057 217 ntBASIC9.05□□□□□ -0.96
MSH5O43196 Y_RNA.415-201ENST00000384012 112 ntBASIC9.05□□□□□ -0.96
MSH5O43196 OR2AM1P-201ENST00000422137 422 ntBASIC9.05□□□□□ -0.96
MSH5O43196 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.05□□□□□ -0.96
MSH5O43196 AC105137.1-201ENST00000484355 562 ntBASIC9.05□□□□□ -0.96
MSH5O43196 AL049874.1-201ENST00000489560 388 ntBASIC9.05□□□□□ -0.96
MSH5O43196 RN7SKP209-201ENST00000516888 304 ntBASIC9.05□□□□□ -0.96
MSH5O43196 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.05□□□□□ -0.96
MSH5O43196 AC105245.1-201ENST00000581934 244 ntBASIC9.05□□□□□ -0.96
MSH5O43196 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC9.05□□□□□ -0.96
MSH5O43196 U3.53-201ENST00000628922 216 ntBASIC9.05□□□□□ -0.96
MSH5O43196 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MSH5O43196 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC9.05□□□□□ -0.96
MSH5O43196 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.05□□□□□ -0.96
MSH5O43196 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MSH5O43196 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
MSH5O43196 RNU6-1245P-201ENST00000411130 106 ntBASIC9.04□□□□□ -0.96
MSH5O43196 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.04□□□□□ -0.96
MSH5O43196 AL391219.1-201ENST00000422570 483 ntBASIC9.04□□□□□ -0.96
MSH5O43196 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC9.04□□□□□ -0.96
MSH5O43196 FABP5P15-201ENST00000453566 214 ntBASIC9.04□□□□□ -0.96
MSH5O43196 RPS26P11-201ENST00000463445 348 ntBASIC9.04□□□□□ -0.96
MSH5O43196 RPS26P6-201ENST00000475156 348 ntBASIC9.04□□□□□ -0.96
MSH5O43196 AC083906.1-201ENST00000509298 406 ntBASIC9.04□□□□□ -0.96
MSH5O43196 HIGD1AP3-201ENST00000515857 278 ntBASIC9.04□□□□□ -0.96
MSH5O43196 RNA5SP116-201ENST00000516132 98 ntBASIC9.04□□□□□ -0.96
MSH5O43196 Y_RNA.666-201ENST00000516187 112 ntBASIC9.04□□□□□ -0.96
MSH5O43196 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MSH5O43196 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.04□□□□□ -0.96
MSH5O43196 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MSH5O43196 CCL14-204ENST00000622526 472 ntTSL 3 BASIC9.04□□□□□ -0.96
MSH5O43196 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC9.04□□□□□ -0.96
MSH5O43196 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
MSH5O43196 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC9.04□□□□□ -0.96
MSH5O43196 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MSH5O43196 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
MSH5O43196 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms